RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SMCO3A2RU48 225 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 TRABD2BA6NFA1 517 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 M0QYG6 137 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 DBHP09172 617 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 THBS2P35442 1172 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 RPL35P42766 123 aaKnown RBP14.89□□□□□ -0.03
GABRB3-215ENST00000622697 ZNF585AQ6P3V2 769 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 CALHM3Q86XJ0 350 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 SGPP2Q8IWX5 399 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 ZNF436Q9C0F3 470 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-215ENST00000622697 NPAP1Q9NZP6 1156 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 SBK2P0C263 348 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 KCNAB1Q14722 419 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 XAF1Q6GPH4 301 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 ZNF620Q6ZNG0 422 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 WDR76Q9H967 626 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 A3GALT2U3KPV4 340 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 CCDC163A0A0D9SF12 145 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 P2RY10O00398 339 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 OR10A3P58181 314 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 GPR157Q5UAW9 335 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 FAM109AQ8N4B1 249 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 SLC7A6Q92536 515 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 TMED7-TICAM2A0A0A6YYA0 188 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 TMEM212A6NML5 194 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 CPEP16870 476 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 ALKBH1Q13686 389 aaKnown RBP14.89□□□□□ -0.03
GABRB3-215ENST00000622697 YOD1Q5VVQ6 348 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-215ENST00000622697 LCORQ96JN0 433 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-215ENST00000622697 ANKRD19PQ9H560 264 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 TMED7Q9Y3B3 224 aa14.89□□□□□ -0.03
GABRB3-215ENST00000622697 NID1P14543 1247 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 HTR2CP28335 458 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 ASB17Q8WXJ9 295 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 SORCS2Q96PQ0 1159 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 AKIP1Q9NQ31 210 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 MCM3APO60318 1980 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 TMEM82A0PJX8 343 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 BPNT1O95861 308 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 IGHG1P01857 330 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 HIST1H1CP16403 213 aaKnown RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 RPS27P42677 84 aaKnown RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 HTR3AP46098 478 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 MRPL49Q13405 166 aaKnown RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 GPR176Q14439 515 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 RBMS2Q15434 407 aaKnown RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 VASH1Q7L8A9 365 aaPredicted RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 OR5T1Q8NG75 326 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 HSD17B8Q92506 261 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 KIAA1143Q96AT1 154 aaPredicted RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 C6orf106Q9H6K1 298 aaPredicted RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 SRPK3Q9UPE1 567 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 HBQ1P09105 142 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 SPNP16150 400 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 CTHP32929 405 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 PPP2CBP62714 309 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 PPP2CAP67775 309 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 KIAA0040Q15053 153 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 USP51Q70EK9 711 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 KCNE3Q9Y6H6 103 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 OR2W5A6NFC9 320 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 CTNSO60931 367 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 CD14P08571 375 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 ZNF28P17035 718 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 CLDN6P56747 220 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 CYCSP99999 105 aaKnown RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 OPCMLQ14982 345 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 FAM160A2Q8N612 972 aaPredicted RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 VN1R3Q9BXE9 311 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 CHRDQ9H2X0 955 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 NUP214P35658 2090 aaPredicted RBP14.88□□□□□ -0.03
GABRB3-215ENST00000622697 DOCK1Q14185 1865 aa14.88□□□□□ -0.03
GABRB3-215ENST00000622697 UPK1AO00322 258 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 TSPAN15O95858 294 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 MRPL19P49406 292 aaKnown RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 POLR2HP52434 150 aaKnown RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 GPLD1P80108 840 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 BTN1A1Q13410 526 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 GALEQ14376 348 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 MEF2DQ14814 521 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 CNRIP1Q96F85 164 aaPredicted RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 SYT3Q9BQG1 590 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 PSD2Q9BQI7 771 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 C20orf85Q9H1P6 137 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 ISG20L2Q9H9L3 353 aaKnown RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 MOKQ9UQ07 419 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 TSFMP43897 325 aaKnown RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 RAE1P78406 368 aaKnown RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 ARHGAP11BQ3KRB8 267 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 EHFQ9NZC4 300 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 ZNF175Q9Y473 711 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 TP53P04637 393 aaPredicted RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 AGERQ15109 404 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 SLC2A12Q8TD20 617 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 ARL11Q969Q4 196 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 ORAI1Q96D31 301 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 HHIPL1Q96JK4 782 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 C19orf53Q9UNZ5 99 aaPredicted RBP14.87□□□□□ -0.03
GABRB3-215ENST00000622697 MED16Q9Y2X0 877 aa14.87□□□□□ -0.03
GABRB3-215ENST00000622697 HOXA9P31269 272 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms