RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 OR51D1Q8NGF3 324 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 FBLIM1Q8WUP2 373 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 MRPL38Q96DV4 380 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 TRMT61AQ96FX7 289 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 CCDC120Q96HB5 630 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 CST11Q9H112 138 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 RBM7Q9Y580 266 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 OR2T1O43869 369 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 EML2O95834 649 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 SEMG1P04279 462 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 SYPP08247 313 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 IRF3Q14653 427 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 RDH10Q8IZV5 341 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 OR6F1Q8NGZ6 308 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 OR2A5Q96R48 311 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ZMAT3Q9HA38 289 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 CHD5Q8TDI0 1954 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 C2orf72A6NCS6 295 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 F5H0A9 414 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 AKR7A2O43488 359 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 PLATP00750 562 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 CCINQ13939 588 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 Q499Y3 187 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 GPR139Q6DWJ6 353 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 WDR77Q9BQA1 342 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 NUDT22Q9BRQ3 303 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 CAMK2AQ9UQM7 478 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 C9J4A7 227 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 ATP1B1P05026 303 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 FGF9P31371 208 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 PTGS2P35354 604 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 MEP1BQ16820 701 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 SWI5Q1ZZU3 235 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 AADACL4Q5VUY2 407 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 COMMD7Q86VX2 200 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 TMEM17Q86X19 198 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 OR1F2PQ96R84 312 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 C7orf50Q9BRJ6 194 aaKnown RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 MED18Q9BUE0 208 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 ZNF350Q9GZX5 532 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 NIPAL2Q9H841 368 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 C12orf4Q9NQ89 552 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 ANKRD34BA5PLL1 514 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 EEF1E1-BLOC1S5C9J1V9 151 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 BRINP1O60477 761 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 OR7A10O76100 309 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 CSTBP04080 98 aaKnown RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 AKR1C4P17516 323 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 SPI1P17947 270 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 POU3F1Q03052 451 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 UBE2NLQ5JXB2 153 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 WDR45BQ5MNZ6 344 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 GARNL3Q5VVW2 1013 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 FAM198BQ6UWH4 519 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 OR2L13Q8N349 312 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 GIMAP5Q96F15 307 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 DERL3Q96Q80 235 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 PLEKHB1Q9UF11 243 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 SIGLEC7Q9Y286 467 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 PRAF2O60831 178 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 SPDEFO95238 335 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 RAB40ALP0C0E4 278 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 CD1CP29017 333 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 S100A10P60903 97 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 MELKQ14680 651 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 MANEAQ5SRI9 462 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 KCTD20Q7Z5Y7 419 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 PM20D2Q8IYS1 436 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 OR4C3Q8NH37 302 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 NPRL2Q8WTW4 380 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 RAB40AQ8WXH6 277 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 FAM71F1Q96KD3 344 aaPredicted RBP11.79□□□□□ -0.52
MSH6-215ENST00000622629 SEC22CQ9BRL7 303 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 POLE3Q9NRF9 147 aa11.79□□□□□ -0.52
MSH6-215ENST00000622629 POM121CA8CG34 1229 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 SYT7O43581 403 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 GLCEO94923 617 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 GABRB1P18505 474 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 SLC2A5P22732 501 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 CRABP1P29762 137 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 PPP1CAP62136 330 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 GPR50Q13585 617 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 YOD1Q5VVQ6 348 aaPredicted RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 CD300LDQ6UXZ3 194 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 MARCH3Q86UD3 253 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 LCORQ96JN0 433 aaPredicted RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 OR2S2Q9NQN1 319 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 EMC3Q9P0I2 261 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 ING1Q9UK53 422 aaPredicted RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 RPH3AQ9Y2J0 694 aaPredicted RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 NOX1Q9Y5S8 564 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 A0A087WV62 115 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 TMEM269A0A1B0GVZ9 245 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 E9PI62 339 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms