RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 CADM2Q8N3J6 435 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 FAM98AQ8NCA5 519 aaKnown RBP15.9■□□□□ 0.14
FAM3A-222ENST00000621967 THAP4Q8WY91 577 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 DDOQ99489 341 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 RBCK1Q9BYM8 510 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 ABRACLQ9P1F3 81 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 CLDN16Q9Y5I7 305 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 IER3IP1Q9Y5U9 82 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 DCDC2BA2VCK2 349 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 BLACEA4D250 179 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 ANKRD61A6NGH8 418 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 EEF1E1O43324 174 aaKnown RBP15.9■□□□□ 0.14
FAM3A-222ENST00000621967 CTNSO60931 367 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 UCHL1P09936 223 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 ATF1P18846 271 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 GBX2P52951 348 aaPredicted RBP15.9■□□□□ 0.14
FAM3A-222ENST00000621967 HCCSP53701 268 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 RPS11P62280 158 aaKnown RBP eCLIP15.9■□□□□ 0.14
FAM3A-222ENST00000621967 SKP1P63208 163 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 MAB21L1Q13394 359 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 DPY19L2P2Q6ZN68 376 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 SLC35F2Q8IXU6 374 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 OR5H6Q8NGV6 325 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 OR14A16Q8NHC5 309 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 ZNF501Q96CX3 271 aaPredicted RBP15.9■□□□□ 0.14
FAM3A-222ENST00000621967 LIN37Q96GY3 246 aaPredicted RBP15.9■□□□□ 0.14
FAM3A-222ENST00000621967 G6PC3Q9BUM1 346 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 Q9N2J8 555 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 OCIAD1Q9NX40 245 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 RPS6KB2Q9UBS0 482 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 RARRES3Q9UL19 164 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 LOXL2Q9Y4K0 774 aa15.9■□□□□ 0.14
FAM3A-222ENST00000621967 A0A1B0GVC2 190 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 C7orf66A4D0T2 115 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 A6NIN4 97 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 ARPC3O15145 178 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 PRAMEF2O60811 474 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 PPM1BO75688 479 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 GATBO75879 557 aaKnown RBP15.89■□□□□ 0.13
FAM3A-222ENST00000621967 ARL6IP5O75915 188 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 UBL3O95164 117 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 CT45A8P0DMV1 189 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 CT45A9P0DMV2 189 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 EPXP11678 715 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 DIO1P49895 249 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 MMP15P51511 669 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 SIRPAP78324 504 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 GRM7Q14831 915 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 CT45A2Q5DJT8 189 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 SLC35D3Q5M8T2 416 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 RPL22L1Q6P5R6 122 aaKnown RBP15.89■□□□□ 0.13
FAM3A-222ENST00000621967 RAB11FIP2Q7L804 512 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 ZNF595Q8IYB9 648 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 DTX3Q8N9I9 347 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 NPEPL1Q8NDH3 523 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 OR1L3Q8NH93 324 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 RPS4Y2Q8TD47 263 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 RBM18Q96H35 190 aaKnown RBP15.89■□□□□ 0.13
FAM3A-222ENST00000621967 ZNF285Q96NJ3 590 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 NMNAT2Q9BZQ4 307 aa15.89■□□□□ 0.13
FAM3A-222ENST00000621967 A0A0A6YYC8 382 aaPredicted RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 I3L1I5 382 aaPredicted RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 EVI2BP34910 448 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 PLA2G5P39877 138 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 RPS4XP62701 263 aaKnown RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 LGALS3BPQ08380 585 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 STX4Q12846 297 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 EIF3IQ13347 325 aaKnown RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 NTRK2Q16620 822 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 CCDC58Q4VC31 144 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 TMPRSS12Q86WS5 348 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 LRRC17Q8N6Y2 441 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 ADAMTS18Q8TE60 1221 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 HSD17B8Q92506 261 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 YIPF5Q969M3 257 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 TTTY10Q9BZA0 68 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 SPRTNQ9H040 489 aaPredicted RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 NRIP3Q9NQ35 241 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 HCN3Q9P1Z3 774 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 MRPS33Q9Y291 106 aaKnown RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 ADAM18Q9Y3Q7 739 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 CCDC187A0A096LP49 1063 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 MAGEB4O15481 346 aaPredicted RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 JMJD7P0C870 316 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 CCL4P13236 92 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 PON3Q15166 354 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 UNQ9370/PRO34162Q6UXP9 181 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 OVCH1Q7RTY7 1134 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 PPP1R3BQ86XI6 285 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 ZNRF4Q8WWF5 429 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 ADAMTS14Q8WXS8 1223 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 SCMH1Q96GD3 660 aa15.88■□□□□ 0.13
FAM3A-222ENST00000621967 GPX7Q96SL4 187 aaPredicted RBP15.88■□□□□ 0.13
FAM3A-222ENST00000621967 A0A0A6YYJ9 748 aa15.87■□□□□ 0.13
FAM3A-222ENST00000621967 SERINC4A6NH21 518 aa15.87■□□□□ 0.13
FAM3A-222ENST00000621967 LRRN3E7EW58 273 aa15.87■□□□□ 0.13
FAM3A-222ENST00000621967 GNB5O14775 395 aa15.87■□□□□ 0.13
FAM3A-222ENST00000621967 ZNF780AO75290 641 aaPredicted RBP15.87■□□□□ 0.13
FAM3A-222ENST00000621967 CSTAP01040 98 aa15.87■□□□□ 0.13
FAM3A-222ENST00000621967 NAA10P41227 235 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms