RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 EIF2S2P20042 333 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 MMP11P24347 488 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 UGT1A5P35504 534 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 CASP4P49662 377 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 GEMP55040 296 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 STX3Q13277 289 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SLAMF1Q13291 335 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 EXOSC2Q13868 293 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 KYAT1Q16773 422 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SLC5A12Q1EHB4 618 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SFT2D3Q587I9 215 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 CT45A2Q5DJT8 189 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 CLVS2Q5SYC1 327 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 C6orf183Q5T699 404 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TWF2Q6IBS0 349 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 FAM71F2Q6NXP2 309 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 GCNT7Q6ZNI0 430 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 PLEKHG7Q6ZR37 379 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 Q6ZRG5 221 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 MRPL21Q7Z2W9 205 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 GOLGA7Q7Z5G4 137 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 ITIH5Q86UX2 942 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 PARGQ86W56 976 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 C17orf64Q86WR6 236 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 ITPRIPQ8IWB1 547 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 FBXO16Q8IX29 292 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TMEM104Q8NE00 496 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TTLQ8NG68 377 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 OR10H4Q8NGA5 316 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 OR51G2Q8NGK0 314 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 OR9G4Q8NGQ1 327 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF564Q8TBZ8 553 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 FAM3CQ92520 227 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 RPL3LQ92901 407 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 CCDC127Q96BQ5 260 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SLC25A36Q96CQ1 311 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 MRPL53Q96EL3 112 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SNF8Q96H20 258 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 AKR1E2Q96JD6 320 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF285Q96NJ3 590 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TUBGCP2Q9BSJ2 902 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 OR2AG1Q9H205 316 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 FAM124BQ9H5Z6 455 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 DHX33Q9H6R0 707 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 ELL3Q9HB65 397 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SLC38A10Q9HBR0 1119 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 PXMP2Q9NR77 195 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 LYARQ9NX58 379 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 APOBEC3BQ9UH17 382 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 LCMT1Q9UIC8 334 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF229Q9UJW7 825 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 EMCNQ9ULC0 261 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 FLVCR2Q9UPI3 526 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 RNF6Q9Y252 685 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 POFUT2Q9Y2G5 429 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 GSTK1Q9Y2Q3 226 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 RAD50Q92878 1312 aa2.96□□□□□ -1.93
BRCA1-229ENST00000621897 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 A0A0A6YYH2 397 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 FBLL1A6NHQ2 334 aaKnown RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 A6NJ64 397 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 TEX46H3BTG2 121 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 H3BTX0 84 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 RAB29O14966 203 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CYTH3O43739 400 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 TXNDC12O95881 172 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 STSP08842 583 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 OCMP0CE72 109 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 ETS2P15036 469 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 NCK1P16333 377 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CNR1P21554 472 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CDH5P33151 784 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CYLC1P35663 651 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 NPBWR2P48146 333 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CDC34P49427 236 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 PLP1P60201 277 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 UBE2G2P60604 165 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 RAB14P61106 215 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 SIGLEC14Q08ET2 396 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 UAP1Q16222 522 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 ACSF3Q4G176 576 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 ACER2Q5QJU3 275 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 TIGD3Q6B0B8 471 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 KCNIP4Q6PIL6 250 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 ASCL4Q6XD76 172 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 PAGE2Q7Z2X7 111 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 AKAP14Q86UN6 197 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 SLC38A6Q8IZM9 456 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 RELL2Q8NC24 303 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 FBXO36Q8NEA4 188 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 OR4D5Q8NGN0 318 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CCDC26Q8TAB7 109 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 VN1R17PQ8TDU5 208 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 GTF2H4Q92759 462 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 C8orf44Q96CB5 159 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 C10orf35Q96D05 121 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 OTUB2Q96DC9 234 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 AMDHD1Q96NU7 426 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 COPS8Q99627 209 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 CTRCQ99895 268 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms