RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MOAP1Q96BY2 351 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ZBED6CLQ96FA7 236 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 DUS3LQ96G46 650 aaKnown RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 TEX37Q96LM6 180 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 RNF145Q96MT1 663 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 CCDC115Q96NT0 180 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ZNF184Q99676 751 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 CCDC3Q9BQI4 270 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SLC39A3Q9BRY0 314 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 TBCDQ9BTW9 1192 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 MS4A8Q9BY19 250 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR51B5Q9H339 312 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 TRIM45Q9H8W5 580 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 CACYBPQ9HB71 228 aaKnown RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 CMTM6Q9NX76 183 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 THUMPD1Q9NXG2 353 aaKnown RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 TBC1D29Q9UFV1 150 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 CD300AQ9UGN4 299 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ATP6V1HQ9UI12 483 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 PHF11Q9UIL8 331 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 PSME2Q9UL46 239 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SAMD4AQ9UPU9 718 aaKnown RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 AURKCQ9UQB9 309 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ENTPD4Q9Y227 616 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 CA5BQ9Y2D0 317 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 PCYT1BQ9Y5K3 369 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 LYVE1Q9Y5Y7 322 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SPIN1Q9Y657 262 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 SESN1Q9Y6P5 492 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 LRP4O75096 1905 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 NUMA1Q14980 2115 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 C2CD3Q4AC94 2353 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 A0A1W2PPV9 198 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 A0A1W2PR77 199 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 A0A1W2PRB8 838 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 TCRBV3S1A0A5B6 114 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 FEZF1A0PJY2 475 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 OR6C74A6NCV1 312 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 B4E171 279 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 C5orf58C9J3I9 102 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 E9PI62 339 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 FXYD1O00168 92 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 TLR4O00206 839 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 SAP18O00422 153 aaKnown RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 CXCR6O00574 342 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 GNGT2O14610 69 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 HAT1O14929 419 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 CASQ2O14958 399 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 TO15178 435 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 VILLO15195 856 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 YKT6O15498 198 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 AQP9O43315 295 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ERI3O43414 337 aaKnown RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 DFNA5O60443 496 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 TBX19O60806 448 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 CSF2P04141 144 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 DCNP07585 359 aaKnown RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 RETP07949 1114 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ABCB1P08183 1280 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 IL3P08700 152 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ZCCHC18P0CG32 403 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ALPPL2P10696 532 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 GATA1P15976 413 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 UGT2B7P16662 529 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 GABRB1P18505 474 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 GGT1P19440 569 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 EFNA1P20827 205 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 ATP6V1B2P21281 511 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ATP6V1C1P21283 382 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 CDH3P22223 829 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 PPP2R1BP30154 601 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 TSPAN7P41732 249 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 MAGEA8P43361 318 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ZFP36L2P47974 494 aaKnown RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 ARRB1P49407 418 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 ERFP50548 548 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ARHGDIAP52565 204 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 RELAQ04206 551 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 RBBP4Q09028 425 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 PNRC1Q12796 327 aaPredicted RBP4.23□□□□□ -1.73
VPS29-212ENST00000621131 FADDQ13158 208 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 FZD2Q14332 565 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 GNA13Q14344 377 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 NDUFA9Q16795 377 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 CMPK2Q5EBM0 449 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 WLSQ5T9L3 541 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 OR4C11Q6IEV9 310 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 FAM71E1Q6IPT2 247 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 FIGLAQ6QHK4 219 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 SPESP1Q6UW49 350 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 IZUMO2Q6UXV1 221 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 DLEU7Q6UYE1 221 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 TMEM26Q6ZUK4 368 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ASPGQ86U10 573 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ANKRD46Q86W74 232 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 TICAM1Q8IUC6 712 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 RIMKLAQ8IXN7 391 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 EID3Q8N140 333 aa4.23□□□□□ -1.73
VPS29-212ENST00000621131 ZCCHC7Q8N3Z6 543 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms