RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MMP15P51511 669 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 HLXQ14774 488 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 FAM74A3Q4VXF1 159 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 NHLRC3Q5JS37 347 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 MBOAT2Q6ZWT7 520 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 RASGRP3Q8IV61 690 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 GID4Q8IVV7 300 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 LINC01555Q8NAE3 123 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 THAP3Q8WTV1 239 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 FCAMRQ8WWV6 532 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 HGDQ93099 445 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ELSPBP1Q96BH3 223 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 KCTD12Q96CX2 325 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ZC3H10Q96K80 434 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 HS6ST2Q96MM7 605 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 PTCHD1Q96NR3 888 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 MYADMQ96S97 322 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 AICDAQ9GZX7 198 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 TSPAN10Q9H1Z9 355 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 LIN7BQ9HAP6 207 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 IL21RQ9HBE5 538 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ACSS1Q9NUB1 689 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 SLC39A1Q9NY26 324 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 COPZ2Q9P299 210 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 CPNE7Q9UBL6 633 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 GMEB2Q9UKD1 530 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 PLEKHM1Q9Y4G2 1056 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ANAPC1Q9H1A4 1944 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 LAMA1P25391 3075 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 A0A1B0GTH9 108 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 GPR89AB7ZAQ6 455 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 MCRIP1C9JLW8 97 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PYCARD-AS1I3L0S3 204 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 GOSR2O14653 212 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 HCRTR2O43614 444 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 RP2O75695 350 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 GPR89BP0CG08 455 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF20P17024 532 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 SNRPNP63162 240 aaKnown RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 CSNK1G2P78368 415 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF85Q03923 595 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 KLF9Q13886 244 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 DEFB110Q30KQ9 67 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 GKN2Q86XP6 184 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 NRROSQ86YC3 692 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 OR52H1Q8NGJ2 320 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 SETD7Q8WTS6 366 aaKnown RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 BPIFA2Q96DR5 249 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ELP4Q96EB1 424 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 SLC6A7Q99884 636 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 C1QTNF2Q9BXJ5 285 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF768Q9H5H4 540 aaKnown RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 UBE2ZQ9H832 354 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PCDHB16Q9NRJ7 776 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 GRHPRQ9UBQ7 328 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ADAM18Q9Y3Q7 739 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 APC2O95996 2303 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PLPP2O43688 288 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PRICKLE3O43900 615 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PLGP00747 810 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ITGA5P08648 1049 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 F3P13726 295 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 S100A11P31949 105 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PTH2RP49190 550 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 TAS2R43P59537 309 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 SORDQ00796 357 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 LCTLQ6UWM7 567 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF227Q86WZ6 799 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 SYNPRQ8TBG9 265 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM239Q8WW34 195 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 MARVELD3Q96A59 401 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 WDR34Q96EX3 536 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 PGLYRP3Q96LB9 341 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 LMF1Q96S06 567 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 ADAT1Q9BUB4 502 aaKnown RBP6.4□□□□□ -1.39
NEDD9-216ENST00000620854 REG4Q9BYZ8 158 aa6.4□□□□□ -1.39
NEDD9-216ENST00000620854 CPED1A4D0V7 1026 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 H7C2Y5 167 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 M0R036 132 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 LINC01565O15544 149 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 LILRB5O75023 590 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SDC3O75056 442 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 DNAJB6O75190 326 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 RLN2P04090 185 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ATP1B1P05026 303 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 HIST1H1TP22492 207 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CCKBRP32239 447 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 BCL6P41182 706 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TNFRSF4P43489 277 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SQSTM1Q13501 440 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TRMT12Q53H54 448 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 METTL11BQ5VVY1 283 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 DCAF12L2Q5VW00 463 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TMUB2Q71RG4 321 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR7G2Q8NG99 324 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR4D10Q8NGI6 311 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR2L2Q8NH16 312 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 MMABQ96EY8 250 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CMKLR1Q99788 373 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SARGQ9BW04 601 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms