RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SNX11Q9Y5W9 270 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 PIP5K1CO60331 668 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 MYF5P13349 255 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 TAS2R46P59540 309 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 GAB1Q13480 694 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 DPY19L2P2Q6ZN68 376 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 GDF7Q7Z4P5 450 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 B3GNT8Q7Z7M8 397 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 PM20D2Q8IYS1 436 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 LSMEM2Q8N112 164 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 OR13C9Q8NGT0 318 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 NEURL3Q96EH8 262 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 ANKRD60Q9BZ19 345 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 NT5DC2Q9H857 520 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 SSC5DA1L4H1 1573 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM221A6NGB7 291 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 EIF4E2O60573 245 aaKnown RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 PHC2Q8IXK0 858 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 BRIX1Q8TDN6 353 aaKnown RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 SARAFQ96BY9 339 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 CNOT2Q9NZN8 540 aaKnown RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 SLC5A10A0PJK1 596 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 HPGDSO60760 199 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 PAHP00439 452 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 H1FNTQ75WM6 255 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 GRINAQ7Z429 371 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 OR5AS1Q8N127 324 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 EXD3Q8N9H8 876 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 OR5D18Q8NGL1 313 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 BAHD1Q8TBE0 780 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 STT3BQ8TCJ2 826 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 SLC25A43Q8WUT9 341 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 MS4A6EQ96DS6 147 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 WWTR1Q9GZV5 400 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 MKRN2Q9H000 416 aaKnown RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 ACKR4Q9NPB9 350 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 RASD1Q9Y272 281 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 NUBP2Q9Y5Y2 271 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 CCDC163A0A0D9SF12 145 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 KLK10O43240 276 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SELEP16581 610 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 MRPS10P82664 201 aaKnown RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 TNK1Q13470 666 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM196Q5HYL7 178 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 AADACL4Q5VUY2 407 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 GDPGP1Q6ZNW5 385 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 LILRA2Q8N149 483 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 C11orf40Q8WZ69 217 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 TAAR9Q96RI9 348 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 NDRG3Q9UGV2 375 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 CCDC187A0A096LP49 1063 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 PMS2P1A4D2B8 440 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 PLPP1O14494 284 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 ARPC1BO15143 372 aaKnown RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 GSTP1P09211 210 aaKnown RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 EDDM3AQ14507 147 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF691Q5VV52 312 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 FRMPD2BQ6IN97 320 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 LCN10Q6JVE6 187 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 CCBE1Q6UXH8 406 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 UPRTQ96BW1 309 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SSX3Q99909 188 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 P2RY12Q9H244 342 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 PAPPA2Q9BXP8 1791 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 A0A0U1RQK1 487 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 MDFIC2A0A1B0GVS7 189 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 UBFD1O14562 309 aaKnown RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 IFNA4P05014 189 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 FAM69AQ5T7M9 428 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 METTL11BQ5VVY1 283 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 OR52W1Q6IF63 320 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SLC22A25Q6T423 547 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 OR6V1Q8N148 313 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 OR56B1Q8NGI3 324 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 OR4A16Q8NH70 328 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 ZFP90Q8TF47 636 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 THAP7Q9BT49 309 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 ST6GAL1P15907 406 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SDHBP21912 280 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 IGFBP6P24592 240 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SLC14A1Q13336 389 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 FAM71E1Q6IPT2 247 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 MAML2Q8IZL2 1156 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 BCORP1Q8N888 145 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 TSNAXQ99598 290 aaKnown RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SELENOIQ9C0D9 397 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 GNB4Q9HAV0 340 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SERTAD4Q9NUC0 356 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 MED17Q9NVC6 651 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 GFOD1Q9NXC2 390 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SIDT1Q9NXL6 827 aaKnown RBP10.49□□□□□ -0.73
CLIP1-219ENST00000620786 PIGLQ9Y2B2 252 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 ANKRD33BA6NCL7 494 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 EDIL3O43854 480 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 NFYBP25208 207 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 GCAP28676 217 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 RIPPLY1Q0D2K3 151 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 PGAP1Q75T13 922 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 GDPD3Q7L5L3 318 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms