RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 WRAP53Q9BUR4 548 aaKnown RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 RPS10P5Q9NQ39 176 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 MEPEQ9NQ76 525 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 MRPS18CQ9Y3D5 142 aaKnown RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 SCN8AQ9UQD0 1980 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 CCDC187A0A096LP49 1063 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 RNASET2O00584 256 aaKnown RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 TBL1XO60907 577 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 TIMP1P01033 207 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 OR4E1P0C645 316 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 BMP7P18075 431 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 KIAA0141Q14154 515 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 HMGN3Q15651 99 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 ZNF322Q6U7Q0 402 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 DRAM2Q6UX65 266 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 DPPA4Q7L190 304 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 RANBP3LQ86VV4 465 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 CDK20Q8IZL9 346 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 MUC20Q8N307 709 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 ARL14EPQ8N8R7 260 aaPredicted RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 OR52I2Q8NH67 350 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 BRIX1Q8TDN6 353 aaKnown RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 BADQ92934 168 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 TM4SF18Q96CE8 201 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 ATG101Q9BSB4 218 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 TMEM38AQ9H6F2 299 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 RHOFQ9HBH0 211 aa9.53□□□□□ -0.88
VPS11-207ENST00000620429 EXOGQ9Y2C4 368 aaKnown RBP9.53□□□□□ -0.88
VPS11-207ENST00000620429 ANKRD61A6NGH8 418 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 RNASEK-C17orf49H0YIS7 233 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 SULT2B1O00204 365 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 EREGO14944 169 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 GBAP04062 536 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 CD74P04233 296 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 THBS1P07996 1170 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 HKR1P10072 659 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 SOAT1P35610 550 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 LIM2P55344 173 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 PLA2G7Q13093 441 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ZNHIT3Q15649 155 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 ELAVL1Q15717 326 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 CDKN3Q16667 212 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 MST1LQ2TV78 715 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ZNF791Q3KP31 576 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 TRIM40Q6P9F5 258 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 RFLNAQ6ZTI6 216 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ESPNLQ6ZVH7 1005 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 LINGO2Q7L985 606 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 CAMKMTQ7Z624 323 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 MRGPREQ86SM8 312 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 THOC6Q86W42 341 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 LRRC56Q8IYG6 542 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 PRSS58Q8IYP2 241 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 TEX19Q8NA77 164 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 OR4D9Q8NGE8 314 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 OR5D16Q8NGK9 328 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 HMGB4Q8WW32 186 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 MAFIPQ8WZ33 124 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 PLD4Q96BZ4 506 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 TMEM208Q9BTX3 173 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 EPHX3Q9H6B9 360 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 FBXW2Q9UKT8 454 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ASF1AQ9Y294 204 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 NPIPB15A6NHN6 443 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 FMO6PO60774 539 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 SOD2P04179 222 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 CD5P06127 495 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 MAT2AP31153 395 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 ZNF630Q2M218 657 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 UBE2NLQ5JXB2 153 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 NKAIN2Q5VXU1 208 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 C11orf88Q6PI97 169 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 SERPINA13PQ6UXR4 307 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ZNF574Q6ZN55 896 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 RABEPKQ7Z6M1 372 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 PXKQ7Z7A4 578 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 PIGXQ8TBF5 258 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 IFI44Q8TCB0 444 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 APOBEC4Q8WW27 367 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 CPNE2Q96FN4 548 aaPredicted RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 F2RL3Q96RI0 385 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 S100A13Q99584 98 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 NRSN2Q9GZP1 204 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 OR52A5Q9H2C5 316 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 TBX21Q9UL17 535 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ANGPT4Q9Y264 503 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 KPTNQ9Y664 436 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 COL4A6Q14031 1691 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ZNF106Q9H2Y7 1883 aaKnown RBP9.52□□□□□ -0.89
VPS11-207ENST00000620429 KIAA1671Q9BY89 1806 aa9.52□□□□□ -0.89
VPS11-207ENST00000620429 ATF1P18846 271 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 MPZP25189 248 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 ADH6P28332 368 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 TIA1P31483 386 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■□□□□ 9.1
VPS11-207ENST00000620429 MPIP34949 423 aa9.51□□□□□ -0.89
VPS11-207ENST00000620429 CD200P41217 278 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms