RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 HOXD1Q9GZZ0 328 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 ENKD1Q9H0I2 346 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 ERVK13-1Q9NX77 482 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 IL20RAQ9UHF4 553 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 SLC35A3Q9Y2D2 325 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 OR10H1Q9Y4A9 318 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 APOL3O95236 402 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 SAGP10523 405 aaPredicted RBP19.47■□□□□ 0.71
SGMS1-210ENST00000619438 PMP22Q01453 160 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 BDH1Q02338 343 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 THSD4Q6ZMP0 1018 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.47■□□□□ 0.71
SGMS1-210ENST00000619438 FAM71CQ8NEG0 241 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 NUBPLQ8TB37 319 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 INPP5EQ9NRR6 644 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 QPCTLQ9NXS2 382 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 TNFRSF10DQ9UBN6 386 aa19.47■□□□□ 0.71
SGMS1-210ENST00000619438 IQCMA0A1B0GVH7 501 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 FUOMA2VDF0 154 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 EDN3P14138 238 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 FUT1P19526 365 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 BCAP31P51572 246 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SLC37A1P57057 533 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 KLHL26Q53HC5 615 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 HLA-DQA1Q5Y7H0 255 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 PLBD1Q6P4A8 553 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 OPN5Q6U736 354 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 RTL4Q6ZR62 310 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 C9orf40Q8IXQ3 194 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 PARP16Q8N5Y8 322 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 ST6GALNAC3Q8NDV1 305 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 DNAJA4Q8WW22 397 aaPredicted RBP19.46■□□□□ 0.71
SGMS1-210ENST00000619438 WDFY2Q96P53 400 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 BARHL1Q9BZE3 327 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SMURF1Q9HCE7 757 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 ICAM5Q9UMF0 924 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 CAB39Q9Y376 341 aaPredicted RBP19.46■□□□□ 0.71
SGMS1-210ENST00000619438 LRRK2Q5S007 2527 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SLC22A31A6NKX4 558 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 OR6C76A6NM76 312 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 LOC110117498-PIK3R3F6TDL0 507 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 KLRC4-KLRK1H3BQV0 150 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 AKAP8O43823 692 aaKnown RBP19.46■□□□□ 0.71
SGMS1-210ENST00000619438 PTNP21246 168 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 GALP22466 123 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SLC6A6P31641 620 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 PPICP45877 212 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 FHL1Q13642 323 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SHFQ7M4L6 423 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 MDGA2Q7Z553 956 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 OAFQ86UD1 273 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 LHFPL3Q86UP9 236 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 ZNF227Q86WZ6 799 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 LYSMD2Q8IV50 215 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 GPALPP1Q8IXQ4 340 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SLC22A8Q8TCC7 542 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SLC25A46Q96AG3 418 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 KCTD7Q96MP8 289 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 SECISBP2Q96T21 854 aaKnown RBP19.46■□□□□ 0.71
SGMS1-210ENST00000619438 IFT27Q9BW83 186 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 RPS6KB2Q9UBS0 482 aa19.46■□□□□ 0.71
SGMS1-210ENST00000619438 KLF13Q9Y2Y9 288 aaPredicted RBP19.46■□□□□ 0.71
SGMS1-210ENST00000619438 C2orf92A0A1B0GVN3 265 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 TRDV1A0A1B0GX56 115 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 SLC35F4A4IF30 521 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 NME2P1O60361 137 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 CSTAP01040 98 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 IGF2P01344 180 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 NGFRP08138 427 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 PEPDP12955 493 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 NME2P22392 152 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 GPR50Q13585 617 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 SPANXN2Q5MJ10 180 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF362Q5T0B9 420 aaPredicted RBP19.45■□□□□ 0.7
SGMS1-210ENST00000619438 ACBD7Q8N6N7 88 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 OR4C3Q8NH37 302 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 SLC19A3Q9BZV2 496 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 SP140LQ9H930 580 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 ASB6Q9NWX5 421 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 HAO2Q9NYQ3 351 aa19.45■□□□□ 0.7
SGMS1-210ENST00000619438 A0A087WUJ7 227 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 FAM183AA6NL82 134 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 RIIAD1A6NNX1 92 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 PRR23D1E9PI22 279 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 PPM1BO75688 479 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 IL33O95760 270 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 PRR23D2P0DMB1 279 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 PAICSP22234 425 aaKnown RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 LCN1P31025 176 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 ATP6V1E1P36543 226 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 SLC9A3P48764 834 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 PSMD7P51665 324 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 RPS25P62851 125 aaKnown RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 FNDC7Q5VTL7 733 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF322Q6U7Q0 402 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 PTP4A1Q93096 173 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 KISS1RQ969F8 398 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 SLX1AQ9BQ83 275 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 WWTR1Q9GZV5 400 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 MCCC2Q9HCC0 563 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms