RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	ING1	Q9UK53	422 aa	Predicted RBP	10.2	□□□□□ -0.78
TP53-223	ENST00000618944	ZNF281	Q9Y2X9	895 aa		10.2	□□□□□ -0.78
TP53-223	ENST00000618944	SDK1	Q7Z5N4	2213 aa		10.2	□□□□□ -0.78
TP53-223	ENST00000618944	LRP4	O75096	1905 aa		10.2	□□□□□ -0.78
TP53-223	ENST00000618944	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CENPBD1	B2RD01	187 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CD14	P08571	375 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	PNMT	P11086	282 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	PTHLH	P12272	177 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	FASLG	P48023	281 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	ZP2	Q05996	745 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	TNK1	Q13470	666 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	SERTAD2	Q14140	314 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	SMUG1	Q53HV7	270 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	FNDC7	Q5VTL7	733 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	LIPN	Q5VXI9	398 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	FAM122B	Q7Z309	247 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	KANSL1	Q7Z3B3	1105 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	GKN2	Q86XP6	184 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	LIX1L	Q8IVB5	337 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	TIGD4	Q8IY51	512 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	ZNF687	Q8N1G0	1237 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	DNAAF1	Q8NEP3	725 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	OR11H7	Q8NGC8	314 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	HAVCR2	Q8TDQ0	301 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	TAAR8	Q969N4	342 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	ZNF578	Q96N58	590 aa	Predicted RBP	10.19	□□□□□ -0.78
TP53-223	ENST00000618944	LMAN1L	Q9HAT1	526 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	MMP25	Q9NPA2	562 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	LANCL2	Q9NS86	450 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CAMK2A	Q9UQM7	478 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	HIF3A	Q9Y2N7	669 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.19	□□□□□ -0.78
TP53-223	ENST00000618944	HCRTR2	O43614	444 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	ICOSLG	O75144	302 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	NUDT14	O95848	222 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	MYF5	P13349	255 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CXCL3	P19876	107 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CD38	P28907	300 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	HTR2B	P41595	481 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	RPL18	Q07020	188 aa	Known RBP	10.19	□□□□□ -0.78
TP53-223	ENST00000618944	FAM209A	Q5JX71	171 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	MARCH3	Q86UD3	253 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	SLC35F3	Q8IY50	421 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	ZNF440	Q8IYI8	595 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	OR6V1	Q8N148	313 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	LRRC75A	Q8NAA5	344 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	SNAPC3	Q92966	411 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	SLC19A3	Q9BZV2	496 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
TP53-223	ENST00000618944	GHITM	Q9H3K2	345 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	WDR76	Q9H967	626 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	LIN7B	Q9HAP6	207 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	CUTC	Q9NTM9	273 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	UCKL1	Q9NWZ5	548 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	FRRS1L	Q9P0K9	344 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	MRM2	Q9UI43	246 aa	Known RBP	10.19	□□□□□ -0.78
TP53-223	ENST00000618944	IKZF2	Q9UKS7	526 aa		10.19	□□□□□ -0.78
TP53-223	ENST00000618944	BLACE	A4D250	179 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	IFITM5	A6NNB3	132 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	TMEM150C	B9EJG8	249 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	C11orf98	E9PRG8	122 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944		H0YIG0	161 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	IL33	O95760	270 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	HIST1H2AB	P04908	130 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	STOM	P27105	288 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	SDHA	P31040	664 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	GDNF	P39905	211 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	PPIC	P45877	212 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	FOXL2	P58012	376 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	OR1D5	P58170	312 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	VWA2	Q5GFL6	755 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	UBE2NL	Q5JXB2	153 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	HIST3H2A	Q7L7L0	130 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	OR6N2	Q8NGY6	317 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	OR8K3	Q8NH51	312 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	ADAMTS18	Q8TE60	1221 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	THEM6	Q8WUY1	208 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	PIGK	Q92643	395 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	HIST1H2AC	Q93077	130 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	SLC25A36	Q96CQ1	311 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	MRPL48	Q96GC5	212 aa	Known RBP	10.18	□□□□□ -0.78
TP53-223	ENST00000618944	SCMH1	Q96GD3	660 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	ZNF285	Q96NJ3	590 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	GON7	Q9BXV9	100 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.18	□□□□□ -0.78
TP53-223	ENST00000618944	ULBP3	Q9BZM4	244 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	OR51J1	Q9H342	316 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	FLVCR2	Q9UPI3	526 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	NUBP2	Q9Y5Y2	271 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	RHPN2P1	A8MT19	583 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	GPRIN2	O60269	458 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	AKR7A3	O95154	331 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	PLG	P00747	810 aa	Predicted RBP	10.18	□□□□□ -0.78
TP53-223	ENST00000618944	H2AFB2	P0C5Z0	115 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	ASAH2B	P0C7U1	165 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	NME1	P15531	152 aa	Known RBP	10.18	□□□□□ -0.78
TP53-223	ENST00000618944	IGFBP4	P22692	258 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	RORA	P35398	523 aa		10.18	□□□□□ -0.78
TP53-223	ENST00000618944	CENPA	P49450	140 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms