RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TLCD2A6NGC4 264 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SNCGO76070 127 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 CLDN1O95832 211 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 GAB1Q13480 694 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 OGFOD3Q6PK18 319 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 LRRTM3Q86VH5 581 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 ASB11Q8WXH4 323 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 PADI1Q9ULC6 663 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 HEATR5BQ9P2D3 2071 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 A0A0D9SG52 128 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 DRGXA6NNA5 263 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 DVL1O14640 695 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 DVL1P1P54792 670 aaPredicted RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 GRB2P62993 217 aaKnown RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 CTBSQ01459 385 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 PTCRAQ6ISU1 281 aaPredicted RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 RFPL4BQ6ZWI9 263 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 VRK2Q86Y07 508 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SMIM3Q9BZL3 60 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 INTS6Q9UL03 887 aaKnown RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 HEATR1Q9H583 2144 aaKnown RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 IMPA2O14732 288 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 AIFM1O95831 613 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 DPP4P27487 766 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 RPE65Q16518 533 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEFF1Q8IYR6 380 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 FRMD1Q8N878 549 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 HDAC8Q9BY41 377 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SELENOIQ9C0D9 397 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 MITFO75030 526 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 AADACP22760 399 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 HNRNPFP52597 415 aaKnown RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 TOGARAM1Q9Y4F4 1720 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF705GA8MUZ8 300 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 SSTR4P31391 388 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 CCR7P32248 378 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ETV4P43268 484 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 PGGT1BP53609 377 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 PRAMEF20Q5VT98 475 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEM40Q8WWA1 233 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 FOXN4Q96NZ1 517 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 KATNB1Q9BVA0 655 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 A0A1B0GTW7 788 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 FZD7O75084 574 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 OR2T7P0C7T2 308 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 TBPP20226 339 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 RAD52P43351 418 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 KCNJ10P78508 379 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 MLF2Q15773 248 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 LRRC56Q8IYG6 542 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF687Q8N1G0 1237 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ABHD6Q9BV23 337 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ADAM19Q9H013 955 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 UTS2O95399 124 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 F13BP05160 661 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 RPS23P62266 143 aaKnown RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 HBA1P69905 142 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 NKAIN3Q8N8D7 197 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 OR7G1Q8NGA0 311 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF480Q8WV37 535 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 KHSRPQ92945 711 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 APOA2P02652 100 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 EDN3P14138 238 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 BPIFB2Q8N4F0 458 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 TEX19Q8NA77 164 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 OR1S2Q8NGQ3 325 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 LCORQ96JN0 433 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEM43Q9BTV4 400 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 FAM234AQ9H0X4 552 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 BABAM2Q9NXR7 383 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 EPHA5P54756 1037 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 RNF4P78317 190 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 YOD1Q5VVQ6 348 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 CATSPERDQ86XM0 798 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 MEX3DQ86XN8 651 aaKnown RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 KCNG3Q8TAE7 436 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 SMAP2Q8WU79 429 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 MITD1Q8WV92 249 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 HSD17B8Q92506 261 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 IP6K3Q96PC2 410 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 NUMBLQ9Y6R0 609 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 RGPD4Q7Z3J3 1758 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 IGKV6-21A0A0C4DH24 114 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEM82A0PJX8 343 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 RAB19A4D1S5 217 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 GFRA2O00451 464 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 GPR171O14626 319 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 PTAFRP25105 342 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 SNTB1Q13884 538 aaKnown RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 HIST2H3PS2Q5TEC6 136 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC35G3Q8N808 338 aa10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC39A9Q9NUM3 307 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms