RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 TMEM201Q5SNT2 666 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 EEF1A1P5Q5VTE0 462 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 MYO7BQ6PIF6 2116 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 CREB3L2Q70SY1 520 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 PXKQ7Z7A4 578 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 EPHX4Q8IUS5 362 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 UEVLDQ8IX04 471 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 CNEP1R1Q8N9A8 125 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZIC4Q8N9L1 334 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 ATG16L2Q8NAA4 619 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF385AQ96PM9 386 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF556Q9HAH1 456 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 MCCC2Q9HCC0 563 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 GP6Q9HCN6 339 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 EMC3Q9P0I2 261 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 HIF3AQ9Y2N7 669 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 FLVCR1Q9Y5Y0 555 aa13.89□□□□□ -0.19
PCDHGC3-204ENST00000617222 PDLIM1O00151 329 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 F13BP05160 661 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 CRHP06850 196 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF26P17031 533 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 GSTM3P21266 225 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 AGTR1P30556 359 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 DAPP51397 102 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 CLDN17P56750 224 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 PRPS1P60891 318 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 RPS4XP62701 263 aaKnown RBP13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 POU3F1Q03052 451 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 ALG10Q5BKT4 473 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 MTFR2Q6P444 385 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 FAM214BQ7L5A3 538 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 NUFIP2Q7Z417 695 aaKnown RBP13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 GALNT5Q7Z7M9 940 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 IGFN1Q86VF2 1251 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 LRRC75AQ8NAA5 344 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 ANKK1Q8NFD2 765 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 SDCCAG3Q96C92 435 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 TACO1Q9BSH4 297 aaKnown RBP13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 UCK2Q9BZX2 261 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 ENKD1Q9H0I2 346 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 DCLRE1BQ9H816 532 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 SMURF2Q9HAU4 748 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 FANCFQ9NPI8 374 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 RNF6Q9Y252 685 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 NOSIPQ9Y314 301 aaKnown RBP13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 EMC9Q9Y3B6 208 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 NOX1Q9Y5S8 564 aa13.88□□□□□ -0.19
PCDHGC3-204ENST00000617222 TRAF3IP2O43734 574 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 TNFSF13O75888 250 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 NDUFB2O95178 105 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 IGFBP1P08833 259 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 NTF4P34130 210 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 OPRM1P35372 400 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 RPL4P36578 427 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 SMSP52788 366 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 CTXN1P60606 82 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 COX10Q12887 443 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 TAF11Q15544 211 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 RFX4Q33E94 735 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 VWA1Q6PCB0 445 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 SMARCD3Q6STE5 483 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 CD300LDQ6UXZ3 194 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 NHLRC1Q6VVB1 395 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 THSD4Q6ZMP0 1018 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 RASSF6Q6ZTQ3 369 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 BTLAQ7Z6A9 289 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 KIF18BQ86Y91 864 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 LIX1LQ8IVB5 337 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 FANK1Q8TC84 345 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 STARD4Q96DR4 205 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 TXNDC15Q96J42 360 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 SAMD8Q96LT4 415 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 CIB1Q99828 191 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 SFXN3Q9BWM7 321 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 GABARAPL1Q9H0R8 117 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 OR52D1Q9H346 318 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 C12orf49Q9H741 205 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 KIF17Q9P2E2 1029 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 NKX1-2Q9UD57 310 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 IL20RAQ9UHF4 553 aa13.87□□□□□ -0.19
PCDHGC3-204ENST00000617222 A0A1W2PRG6 482 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 MCIDASD6RGH6 385 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 MRPL33O75394 65 aaKnown RBP13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 IL18BPO95998 194 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 BCL10O95999 233 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 IFNGR1P15260 489 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 BMP5P22003 454 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 FXYD6P3P58550 94 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 KLHL17Q6TDP4 642 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF620Q6ZNG0 422 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 SLC35D2Q76EJ3 337 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 AAED1Q7RTV5 226 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 OR6K3Q8NGY3 331 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 TMEM45BQ96B21 275 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 EMC6Q9BV81 110 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 NDEL1Q9GZM8 345 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms