RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TMEM5Q9Y2B1 443 aa13.23□□□□□ -0.29
UBXN1-218ENST00000616865 RRP15Q9Y3B9 282 aaKnown RBP13.23□□□□□ -0.29
UBXN1-218ENST00000616865 IGKV1D-42A0A075B6H8 117 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 A0A087WUU8 490 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 SH3PXD2BA1X283 911 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 HTR3EA5X5Y0 456 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 A8MXE2 369 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 H0YC42 278 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 CASKO14936 926 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 CXCL13O43927 109 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 PIP5K1CO60331 668 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 PMS2P2O95744 297 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 CH25HO95992 272 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 FPR1P21462 350 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 CBLP22681 906 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 DIO1P49895 249 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 SUCLG1P53597 346 aaKnown RBP13.22□□□□□ -0.29
UBXN1-218ENST00000616865 TPD52P55327 224 aaPredicted RBP13.22□□□□□ -0.29
UBXN1-218ENST00000616865 IL1RL1Q01638 556 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 PPP1R8Q12972 351 aaKnown RBP13.22□□□□□ -0.29
UBXN1-218ENST00000616865 MFSD13AQ14CX5 517 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 RCN1Q15293 331 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 FAM69AQ5T7M9 428 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 TBPL2Q6SJ96 375 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 TMPPEQ6ZT21 453 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 P4HA3Q7Z4N8 544 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 NRMQ8IXM6 262 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 ICA1LQ8NDH6 482 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 MFSD8Q8NHS3 518 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 GIPC3Q8TF64 312 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 TAAR8Q969N4 342 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
UBXN1-218ENST00000616865 ARL5BQ96KC2 179 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 NAA11Q9BSU3 229 aaPredicted RBP13.22□□□□□ -0.29
UBXN1-218ENST00000616865 ASPNQ9BXN1 380 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 SEMA6AQ9H2E6 1030 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 VNN3Q9NY84 501 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 NDRG3Q9UGV2 375 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
UBXN1-218ENST00000616865 TRAPPC4Q9Y296 219 aa13.22□□□□□ -0.29
UBXN1-218ENST00000616865 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.29
UBXN1-218ENST00000616865 H3BNX3 289 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 TNFSF13O75888 250 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 LY6G6DO95868 133 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.29
UBXN1-218ENST00000616865 ZNF23P17027 643 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 ENPP1P22413 925 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 HMGA2P52926 109 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 EGR4Q05215 589 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 MICAQ29983 383 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 PQLC1Q8N2U9 271 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 OR5K1Q8NHB7 308 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.29
UBXN1-218ENST00000616865 BPIFA2Q96DR5 249 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 PKP2Q99959 881 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 ZNF426Q9BUY5 554 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 NANSQ9NR45 359 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 PDP1Q9P0J1 537 aaPredicted RBP13.21□□□□□ -0.29
UBXN1-218ENST00000616865 KIF17Q9P2E2 1029 aa13.21□□□□□ -0.29
UBXN1-218ENST00000616865 RAI1Q7Z5J4 1906 aaPredicted RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 A0A1W2PNV4 684 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 LIPT2A6NK58 231 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 EFCAB9A8MZ26 197 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 SIAH2O43255 324 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 DNPH1O43598 174 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 SMPD2O60906 423 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 NPIPB7O75200 414 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 OR7A10O76100 309 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 OR6A2O95222 327 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 MT-ATP6P00846 226 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 IMPDH2P12268 514 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 FUT4P22083 530 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 GPR4P46093 362 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 RAC3P60763 192 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 PRKCDQ05655 676 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 SEC23BQ15437 767 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 TAF11Q15544 211 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 CTU2Q2VPK5 515 aaKnown RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 EEF1A1P5Q5VTE0 462 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 LSRQ86X29 649 aaPredicted RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 ZDHHC13Q8IUH4 622 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 CIARTQ8N365 385 aaPredicted RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 OR4C15Q8NGM1 316 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 OR6S1Q8NH40 331 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 PIGTQ969N2 578 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 FAM46AQ96IP4 442 aaKnown RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 Q96MF0 132 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 NDEL1Q9GZM8 345 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 DCLRE1BQ9H816 532 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 FKRPQ9H9S5 495 aa13.2□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF556Q9HAH1 456 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms