RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 P2RY4P51582 365 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 SPCS3P61009 180 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR11G2Q8NGC1 345 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 CXorf40BQ96DE9 158 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF559Q9BR84 538 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 PLAGL1Q9UM63 463 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 MRPS33Q9Y291 106 aaKnown RBP12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 FAM221BA6H8Z2 402 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 PNPP00491 289 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 KCNE1P15382 129 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 PSMA3P25788 255 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 GNG10P50151 68 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 GZMMP51124 257 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 LRP11Q86VZ4 500 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 SIRT6Q8N6T7 355 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 RAB7BQ96AH8 199 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC25A44Q96H78 314 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR11A1Q9GZK7 315 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ARL5CA6NH57 179 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF354AO60765 605 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 IGFALSP35858 605 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF239Q16600 458 aaKnown RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 AMZ1Q400G9 498 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 GGNBP1Q5YKI7 109 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZC3H14Q6PJT7 736 aaKnown RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 VRK2Q86Y07 508 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 TMEM68Q96MH6 324 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 A0A1B0GTQ1 180 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 DFFBO76075 338 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 MMP7P09237 267 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 SELLP14151 372 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 CSNK2A2P19784 350 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 PSMB6P28072 239 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 CRMP1Q14194 572 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 REC114Q7Z4M0 266 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC35F2Q8IXU6 374 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 MCOLN1Q9GZU1 580 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF230Q9UIE0 474 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ADRB3P13945 408 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 CASRP41180 1078 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 GAMTQ14353 236 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 IRF4Q15306 451 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNHIT3Q15649 155 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 EID2Q8N6I1 236 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 HSD17B11Q8NBQ5 300 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR2AP1Q8NGE2 309 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 RGP1Q92546 391 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 FAM212BQ9NTI7 297 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 TAC3Q9UHF0 121 aa12.53□□□□□ -0.4
PPP4R3B-205ENST00000616288 A0A1W2PS29 197 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 KDELR3O43731 214 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 SERPINA2P20848 420 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBPL1P62380 186 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 CCINQ13939 588 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC36A2Q495M3 483 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 FAM185AQ8N0U4 392 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 COX18Q8N8Q8 333 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 FRZBQ92765 325 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR5B12Q96R08 314 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 CKAP5Q14008 2032 aa12.52□□□□□ -0.4
PPP4R3B-205ENST00000616288 SCN9AQ15858 1988 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 RDH16O75452 317 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 DHPSP49366 369 aaPredicted RBP12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 GSK3AP49840 483 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 SQSTM1Q13501 440 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 PRAMEF14Q5SWL7 426 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 FAM46CQ5VWP2 391 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 PCDHGA5Q9Y5G8 931 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 K7ERQ8 282 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 KLF9Q13886 244 aaPredicted RBP12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 DOC2BQ14184 412 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 ENTPD8Q5MY95 495 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 C19orf48Q6RUI8 117 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 CACUL1Q86Y37 369 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 ZCCHC10Q8TBK6 192 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 HAS2Q92819 552 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 FAM46BQ96A09 425 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 IL17FQ96PD4 163 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 GAB2Q9UQC2 676 aa12.52□□□□□ -0.41
PPP4R3B-205ENST00000616288 GPR89AB7ZAQ6 455 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms