RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ETFDHQ16134 617 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF74Q16587 644 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PGGHGQ32M88 737 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PDSS1Q5T2R2 415 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FAM69AQ5T7M9 428 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GLYATQ6IB77 296 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 C6orf89Q6UWU4 347 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 BEND4Q6ZU67 534 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 NRMQ8IXM6 262 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PCYOX1LQ8NBM8 494 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 KCTD14Q9BQ13 255 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF426Q9BUY5 554 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 EFCAB1Q9HAE3 211 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM27Q9HBJ8 222 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ASB6Q9NWX5 421 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 VNN3Q9NY84 501 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TESQ9UGI8 421 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CD300AQ9UGN4 299 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ARL2BPQ9Y2Y0 163 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ADAM18Q9Y3Q7 739 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TRIM64A6NGJ6 449 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TRIM64BA6NI03 449 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF724A8MTY0 619 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 BBIP1A8MTZ0 92 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ATE1O95260 518 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SLC2A10O95528 541 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 HLA-HP01893 362 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CRHP06850 196 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 B4GALT1P15291 398 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GGT1P19440 569 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PSMB1P20618 241 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 COX5AP20674 150 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 IL32P24001 234 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 HTR3AP46098 478 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SLC16A1P53985 500 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FXYD6P3P58550 94 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TAS2R41P59536 307 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SORDQ00796 357 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 RBBP4Q09028 425 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SF3B4Q15427 424 aaKnown RBP eCLIP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FKBP9P1Q75LS8 142 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 KIF18BQ86Y91 864 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SLC43A2Q8N370 569 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 OR13C2Q8NGS9 318 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SLC7A13Q8TCU3 470 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FAM222BQ8WU58 562 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 AKAP1Q92667 903 aaKnown RBP eCLIP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 OR2M2Q96R28 347 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 POTEKPQ9BYX7 375 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 THUMPD1Q9NXG2 353 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PAQR5Q9NXK6 330 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 STOML1Q9UBI4 398 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 MALT1Q9UDY8 824 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 NDRG3Q9UGV2 375 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 MAGED1Q9Y5V3 778 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FBN1P35555 2871 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 A0A087WUU8 490 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CIB4A0PJX0 185 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 B2RBV5 119 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SHISA9B4DS77 424 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 M0R1B8 84 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CHP2O43745 196 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SCG5P05408 212 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 UMPSP11172 480 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ANOS1P23352 680 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 BIDP55957 195 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 IRX1P78414 480 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ROR2Q01974 943 aaKnown RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 KEAP1Q14145 624 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CEACAM16Q2WEN9 425 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 COQ5Q5HYK3 327 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 LRFN4Q6PJG9 635 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM123Q8N131 208 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 MFSD8Q8NHS3 518 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 C7orf34Q96L11 122 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TAPBPLQ9BX59 468 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 GID8Q9NWU2 228 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 NDUFAF4Q9P032 175 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CORO2BQ9UQ03 480 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SLC25A15Q9Y619 301 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 DNHD1Q96M86 4753 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TRAV36DV7A0A075B6V5 113 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ATP6V1G2-DDX39BF2Z307 99 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 UBOX5O94941 541 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CD8AP01732 235 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF43P17038 809 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CALCRP30988 508 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ADAM8P78325 824 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ARF1P84077 181 aaKnown RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 RPL18Q07020 188 aaKnown RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 PMS2P3Q13401 168 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 KLHL24Q6TFL4 600 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 THSD4Q6ZMP0 1018 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF704Q6ZNC4 412 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CBLL1Q75N03 491 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 H1FNTQ75WM6 255 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 PATL1Q86TB9 770 aaKnown RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 RANBP3LQ86VV4 465 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF440Q8IYI8 595 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms