RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 EMCNQ9ULC0 261 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 EDDM13A0A1B0GTR0 161 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 TMEM210A6NLX4 147 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FABP4P15090 132 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FPR3P25089 353 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FAHD2BQ6P2I3 314 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 BOLLQ8N9W6 283 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 FAHD2AQ96GK7 314 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 CPPED1Q9BRF8 314 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 MARVELD1Q9BSK0 173 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 POLLQ9UGP5 575 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PCDHGC4Q9Y5F7 938 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 HS3ST4Q9Y661 456 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PCP4P48539 62 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 ZCCHC10Q8TBK6 192 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 GPR52Q9Y2T5 361 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 LOC102725191A0A1B0GVB3 256 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 DCTN6O00399 190 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 CCSO14618 274 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 CDKN2DP55273 166 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 WDR20Q8TBZ3 569 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 LMF1Q96S06 567 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 TMEM59Q9BXS4 323 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 RALYQ9UKM9 306 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 NPIPA3F8WFD2 350 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 NRP1O14786 923 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 DDAH2O95865 285 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 LAMP1P11279 417 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 BSGP35613 385 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FASLGP48023 281 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 ACTR1AP61163 376 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 LRRC32Q14392 662 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 A4GALTQ9NPC4 353 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 MED1Q15648 1581 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 GRXCR1A8MXD5 290 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 ALDOCP09972 364 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 CCR6P51684 374 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PCBD1P61457 104 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 HAGHQ16775 308 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PRR27Q6MZM9 219 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 ARSGQ96EG1 525 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 KLRF1Q9NZS2 232 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 GJD2Q9UKL4 321 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 CA14Q9ULX7 337 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PCDHGA1Q9Y5H4 931 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 CXorf65A6NEN9 183 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 EEF1DP3Q658K8 133 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 DPPA4Q7L190 304 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 TAS1R3Q7RTX0 852 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 OR10D4PQ8NGN7 298 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 LMO3Q8TAP4 145 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PSMF1Q92530 271 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 NUDT16L1Q9BRJ7 211 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 SUCNR1Q9BXA5 334 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 EGLN3Q9H6Z9 239 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 VSTM2BA6NLU5 285 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 MPIG6BO95866 241 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 APODP05090 189 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 APEHP13798 732 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 NQO2P16083 231 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 SNRPEP62304 92 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 ELOBQ15370 118 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 GLDNQ6ZMI3 551 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 OR4D6Q8NGJ1 314 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PHOSPHO1Q8TCT1 267 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FAM3CQ92520 227 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 NCOR1P1Q9H4R4 102 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.17□□□□□ -1.1
TTC28-208ENST00000612946 NECAP2Q9NVZ3 263 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 TAC3Q9UHF0 121 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 GDF2Q9UK05 429 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 RNF24Q9Y225 148 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 MANSC4A6NHS7 340 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 VEGFDO43915 354 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 KLRK1P26718 216 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 PREPP48147 710 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 OR4D1Q15615 310 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FAM180BQ6P0A1 224 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 COMMD6Q7Z4G1 85 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 DND1Q8IYX4 353 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 CFAP52Q8N1V2 620 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 NUDCD2Q8WVJ2 157 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 EMG1Q92979 244 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 RBM38Q9H0Z9 239 aaKnown RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 MEIKINA0A087WXM9 373 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 GPR31O00270 319 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PINX1Q96BK5 328 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 B3GALT5Q9Y2C3 310 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZCWPW2A0A1B0GU75 182 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 SELENOFO60613 162 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 GCGP01275 180 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF90Q03938 601 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF345Q14585 488 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 TMEM239Q8WW34 195 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms