RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 KRR1Q13601 381 aaKnown RBP19.43■□□□□ 0.7
USP6NL-204ENST00000606752 GALNT16Q8N428 558 aa19.43■□□□□ 0.7
USP6NL-204ENST00000606752 ZNF248Q8NDW4 579 aa19.43■□□□□ 0.7
USP6NL-204ENST00000606752 NXPE2Q96DL1 559 aa19.43■□□□□ 0.7
USP6NL-204ENST00000606752 TSC22D3Q99576 134 aa19.43■□□□□ 0.7
USP6NL-204ENST00000606752 BCL7BQ9BQE9 202 aa19.43■□□□□ 0.7
USP6NL-204ENST00000606752 ALKBH4Q9NXW9 302 aa19.43■□□□□ 0.7
USP6NL-204ENST00000606752 TRIM64BA6NI03 449 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 CDK2AP1O14519 115 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 NEURL1O76050 574 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 GABARAPO95166 117 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 ATE1O95260 518 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 F10P00742 488 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 LIMS3P0CW19 117 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 LIMS4P0CW20 117 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 RGS6P49758 472 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 SLC25A1P53007 311 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 SOX8P57073 446 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 PUDPQ08623 228 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 POU4F2Q12837 409 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 PON3Q15166 354 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 GLYR1Q49A26 553 aaPredicted RBP19.42■□□□□ 0.7
USP6NL-204ENST00000606752 SLC35D3Q5M8T2 416 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 ERI1Q8IV48 349 aaKnown RBP19.42■□□□□ 0.7
USP6NL-204ENST00000606752 ACBD7Q8N6N7 88 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 ARIH2OSQ8N7S6 290 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 UBL7Q96S82 380 aaPredicted RBP19.42■□□□□ 0.7
USP6NL-204ENST00000606752 TMEM185BQ9H7F4 350 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 DEPPQ9NTK1 212 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 ASB6Q9NWX5 421 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 B3GALT5Q9Y2C3 310 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 HDGFL3Q9Y3E1 203 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 CPAMD8Q8IZJ3 1885 aa19.42■□□□□ 0.7
USP6NL-204ENST00000606752 ARGFXA6NJG6 315 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 MS4A18H0YCH9 400 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 WDPCPO95876 746 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 ZNF17P17021 662 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 SPI1P17947 270 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 PCSK6P29122 969 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 SRD5A2P31213 254 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 RPL27P61353 136 aaKnown RBP19.41■□□□□ 0.7
USP6NL-204ENST00000606752 ACKR1Q16570 336 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 CTF1Q16619 201 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 MS4A18Q3C1V0 323 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 TMEM176BQ3YBM2 270 aaPredicted RBP19.41■□□□□ 0.7
USP6NL-204ENST00000606752 MESTQ5EB52 335 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 RAET1LQ5VY80 246 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 LINC00696Q6ZRV3 163 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 LHFPL3Q86UP9 236 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 GHDCQ8N2G8 530 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 ZPLD1Q8TCW7 415 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 TXNIPQ9H3M7 391 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 CHST11Q9NPF2 352 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 ERVK13-1Q9NX77 482 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 CNTRLQ7Z7A1 2325 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 FREM2Q5SZK8 3169 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 NKX2-8O15522 239 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 IGHMP01871 453 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 OPN1LWP04000 364 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 SCG5P05408 212 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 SBK2P0C263 348 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 DIO1P49895 249 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 WNT4P56705 351 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 TLE3Q04726 772 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 SRSF6Q13247 344 aaKnown RBP19.41■□□□□ 0.7
USP6NL-204ENST00000606752 DOC2BQ14184 412 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 LCN1P1Q5VSP4 162 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 SIGLEC12Q96PQ1 595 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 OR5B2Q96R09 309 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 PIGQQ9BRB3 760 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 ZNF649Q9BS31 505 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 CXorf56Q9H5V9 222 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 ADGRL4Q9HBW9 690 aa19.41■□□□□ 0.7
USP6NL-204ENST00000606752 OR2M5A3KFT3 312 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 LRRC3CA6NJW4 275 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 NR4A1P22736 598 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 GPR85P60893 370 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 OR2G6Q5TZ20 316 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 OPALINQ96PE5 141 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 RPRD1BQ9NQG5 326 aaKnown RBP19.4■□□□□ 0.7
USP6NL-204ENST00000606752 INPP5EQ9NRR6 644 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 TRAPPC4Q9Y296 219 aa19.4■□□□□ 0.7
USP6NL-204ENST00000606752 A0A1W2PRG6 482 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 TRABD2BA6NFA1 517 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 C12orf71A8MTZ7 269 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 CCRL2O00421 344 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 XKRYO14609 159 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 PLGP00747 810 aaPredicted RBP19.39■□□□□ 0.7
USP6NL-204ENST00000606752 RENP00797 406 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 PRKAR1AP10644 381 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 SHC1P29353 583 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 SFTPDP35247 375 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 MLLT11Q13015 90 aaPredicted RBP19.39■□□□□ 0.7
USP6NL-204ENST00000606752 GGTLC2Q14390 218 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 OR1C1Q15619 314 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 TSTQ16762 297 aaKnown RBP19.39■□□□□ 0.7
USP6NL-204ENST00000606752 AGAP7PQ5VUJ5 663 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 ADCK1Q86TW2 530 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 OR51L1Q8NGJ5 315 aa19.39■□□□□ 0.7
USP6NL-204ENST00000606752 ZNF519Q8TB69 540 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms