RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TUBA1AQ71U36 451 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 KRT73Q86Y46 540 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 GPR137CQ8N3F9 429 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 OR4F15Q8NGB8 312 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ZNF417Q8TAU3 575 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 SLC38A4Q969I6 547 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 FOXN4Q96NZ1 517 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 SORCS2Q96PQ0 1159 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 OR2M2Q96R28 347 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ZNF587Q96SQ5 575 aaPredicted RBP6.62□□□□□ -1.35
CUX1-219ENST00000606749 KCNK17Q96T54 332 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 WFDC6Q9BQY6 131 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 CCDC28BQ9BUN5 200 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 SPATA5L1Q9BVQ7 753 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 PLK3Q9H4B4 646 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 TMEM38AQ9H6F2 299 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 SEC61A2Q9H9S3 476 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 GPR35Q9HC97 309 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 MOV10Q9HCE1 1003 aaKnown RBP6.62□□□□□ -1.35
CUX1-219ENST00000606749 SLCO1B3Q9NPD5 702 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 TMEM160Q9NX00 188 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ARFGEF3Q5TH69 2177 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 A0A087WUJ7 227 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 TRBV5-3A0A0A0MS03 114 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 LOC390937A0A1W2PQ73 354 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 RNF212BA8MTL3 300 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 EVPLLA8MZ36 301 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 B9A039 149 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 NDUFS8O00217 210 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 POLR3GO15318 223 aaPredicted RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 TRAF3IP2O43734 574 aaPredicted RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 TPST2O60704 377 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 SERPINB7O75635 380 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 PDE5AO76074 875 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 MFN2O95140 757 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 HPRP00739 348 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 BGLAPP02818 100 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 CELA3BP08861 270 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 FAM157CP0CG43 387 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 HLA-DOBP13765 273 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 PPIBP23284 216 aaKnown RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 SLC6A2P23975 617 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 THBS4P35443 961 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 NR4A2P43354 598 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 PDLIM4P50479 330 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 SNRPD2P62316 118 aaKnown RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 SCARB2Q14108 478 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 MFSD13AQ14CX5 517 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 OR1Q1Q15612 314 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 EFNB3Q15768 340 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 CEACAM16Q2WEN9 425 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 AGKQ53H12 422 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 PHYHD1Q5SRE7 291 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 FAM91A1Q658Y4 838 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 DLEU7Q6UYE1 221 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 SLC46A3Q7Z3Q1 461 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 MYPOPQ86VE0 399 aaPredicted RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 CCDC36Q8IYA8 594 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 TMEM123Q8N131 208 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 ANKS4BQ8N8V4 417 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 ADPRHL1Q8NDY3 354 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 PIK3C3Q8NEB9 887 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 NUP37Q8NFH4 326 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 BHLHE22Q8NFJ8 381 aaPredicted RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 OR6S1Q8NH40 331 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 LRRC8CQ8TDW0 803 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 SLC47A1Q96FL8 570 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 SLC41A3Q96GZ6 507 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 TXNDC15Q96J42 360 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 ZNF607Q96SK3 696 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 DOK1Q99704 481 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 VRK1Q99986 396 aaPredicted RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 BEX2Q9BXY8 128 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 IKZF5Q9H5V7 419 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 TMEM27Q9HBJ8 222 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 CRLF2Q9HC73 371 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 KLHL14Q9P2G3 628 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 CDC42EP3Q9UKI2 254 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 FKBP7Q9Y680 259 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 SONP18583 2426 aaKnown RBP6.61□□□□□ -1.35
CUX1-219ENST00000606749 CUBNO60494 3623 aa6.61□□□□□ -1.35
CUX1-219ENST00000606749 IGHV2OR16-5A0A0B4J2B6 119 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 A0A0B4J2E0 115 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 A0A1B0GX12 115 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 TMEM129A0AVI4 362 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 SLC35F4A4IF30 521 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 PRORSD1PA6NEY8 169 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 VSTM5A8MXK1 200 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ZNF99A8MXY4 864 aaPredicted RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 M0R3G1 203 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 LMX1BO60663 402 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 NQO1P15559 274 aaKnown RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 AQP1P29972 269 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ARR3P36575 388 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 GZMKP49863 264 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 PPOXP50336 477 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ATP4BP51164 291 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 IDH3GP51553 393 aaPredicted RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 AQP5P55064 265 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms