RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 IQCCQ4KMZ1 466 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 CASP12Q6UXS9 341 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 AAED1Q7RTV5 226 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 NANOGNBQ7Z5D8 188 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 PXKQ7Z7A4 578 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 NRMQ8IXM6 262 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 KDM8Q8N371 416 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 SLC7A13Q8TCU3 470 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 DHRS1Q96LJ7 313 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 ENKD1Q9H0I2 346 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 YY1AP1Q9H869 796 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 C20orf141Q9NUB4 165 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 SEC14L4Q9UDX3 406 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 AURKCQ9UQB9 309 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 TMEM5Q9Y2B1 443 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 TESMINQ9Y4I5 508 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 NOX1Q9Y5S8 564 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.38
CTSA-211ENST00000606066 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 CIB2O75838 187 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 COX6B1P14854 86 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 RRM2P31350 389 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 IFNGR2P38484 337 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 ZP4Q12836 540 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 P2RY6Q15077 328 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 PODNL1Q6PEZ8 512 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
CTSA-211ENST00000606066 ASRGL1Q7L266 308 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 SLC46A3Q7Z3Q1 461 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 EPHX4Q8IUS5 362 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 UBE2J2Q8N2K1 259 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 LRRC17Q8N6Y2 441 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 ANKK1Q8NFD2 765 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 OR52J3Q8NH60 311 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 LURAP1Q96LR2 239 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 ZNF385AQ96PM9 386 aaKnown RBP12.64□□□□□ -0.39
CTSA-211ENST00000606066 HDHD5Q9BXW7 423 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
CTSA-211ENST00000606066 EFCAB9A8MZ26 197 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 C16orf97H3BN30 126 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 BLOC1S5-TXNDC5H3BN57 136 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 RNF13O43567 381 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 SAGP10523 405 aaPredicted RBP12.63□□□□□ -0.39
CTSA-211ENST00000606066 IGFBP2P18065 325 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 SLC9A3P48764 834 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 TAF11Q15544 211 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 ANKDD1AQ495B1 522 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 C1orf146Q5VVC0 180 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 FBXW9Q5XUX1 488 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 Q6ZT83 130 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 DMRTC2Q8IXT2 367 aaPredicted RBP12.63□□□□□ -0.39
CTSA-211ENST00000606066 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 POMGNT2Q8NAT1 580 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 CANT1Q8WVQ1 401 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 ALPK1Q96QP1 1244 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 USB1Q9BQ65 265 aaKnown RBP12.63□□□□□ -0.39
CTSA-211ENST00000606066 CHID1Q9BWS9 393 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 TAS2R5Q9NYW4 299 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 UPB1Q9UBR1 384 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 RCE1Q9Y256 329 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 GPR52Q9Y2T5 361 aa12.63□□□□□ -0.39
CTSA-211ENST00000606066 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 TRBV4-1A0A0J9YWV2 114 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 TCRBV3S1A0A5B6 114 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 TUBAL3A6NHL2 446 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 ZNF726A6NNF4 738 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 TNFRSF11BO00300 401 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 PIP5K1CO60331 668 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 KRT33AO76009 404 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 FUT4P22083 530 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 NTF4P34130 210 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 UGT2B10P36537 528 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 KIR2DL3P43628 341 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 HMGA2P52926 109 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 CLDN17P56750 224 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTSA-211ENST00000606066 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
CTSA-211ENST00000606066 GK3PQ14409 553 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 NIPAL3Q6P499 406 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
CTSA-211ENST00000606066 YTHDF3Q7Z739 585 aaKnown RBP12.62□□□□□ -0.39
CTSA-211ENST00000606066 OAFQ86UD1 273 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 GABRG1Q8N1C3 465 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 OR4K5Q8NGD3 323 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
CTSA-211ENST00000606066 NDEL1Q9GZM8 345 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 OR10A4Q9H209 315 aa12.62□□□□□ -0.39
CTSA-211ENST00000606066 REEP1Q9H902 201 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms