RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 GLT8D1Q68CQ7 371 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 DMKNQ6E0U4 476 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 IL31Q6EBC2 164 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SFRP4Q6FHJ7 346 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3CQ6IPX1 549 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TSSK4Q6SA08 328 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 APOOLQ6UXV4 268 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF627Q7L945 461 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 LINGO2Q7L985 606 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CTU1Q7Z7A3 348 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMPRSS11BQ86T26 416 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PEG10Q86TG7 708 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SYT12Q8IV01 421 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 C9orf40Q8IXQ3 194 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3Q8IZP1 549 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 GTPBP8Q8N3Z3 284 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 COMMD1Q8N668 190 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ACBD7Q8N6N7 88 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SIDT2Q8NBJ9 832 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 RELL2Q8NC24 303 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MORN4Q8NDC4 146 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR1S2Q8NGQ3 325 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR13C4Q8NGS5 318 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR5J2Q8NH18 312 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR5R1Q8NH85 324 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 LYPD6BQ8NI32 183 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PIGXQ8TBF5 258 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC2A12Q8TD20 617 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 C2CD4CQ8TF44 421 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SPRYD4Q8WW59 207 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ACOT11Q8WXI4 607 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRPS31Q92665 395 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMARCD1Q96GM5 515 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 APIPQ96GX9 242 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF668Q96K58 619 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMIM8Q96KF7 97 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CAMK1GQ96NX5 476 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TSSK3Q96PN8 268 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 FRG2BQ96QU4 278 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TIMP4Q99727 224 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMOQ99835 787 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 EGFL8Q99944 293 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 VRK1Q99986 396 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NRIP2Q9BQI9 281 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC25A21Q9BQT8 299 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TEX12Q9BXU0 123 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ADGRE3Q9BY15 652 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CHIAQ9BZP6 476 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR10A4Q9H209 315 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SYT4Q9H2B2 425 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 UBQLN3Q9H347 655 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMDT1Q9H4I9 107 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D17Q9HA65 648 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 A4GALTQ9NPC4 353 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NMRK2Q9NPI5 230 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SEMA4GQ9NTN9 838 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NCDNQ9UBB6 729 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NFKBIL1Q9UBC1 381 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 VPS29Q9UBQ0 182 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF107Q9UII5 783 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 LAMP5Q9UJQ1 280 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 FBXW2Q9UKT8 454 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 FLVCR2Q9UPI3 526 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC9A8Q9Y2E8 581 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PCDHGA5Q9Y5G8 931 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SNX10Q9Y5X0 201 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 KPTNQ9Y664 436 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARL5AQ9Y689 179 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLXNA4Q9HCM2 1894 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A087WUJ7 227 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 SYNJ2BP-COX16A0A087WUM0 186 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 FXYD6-FXYD2A0A087WZ82 144 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 TRBV5-4A0A0C4DH59 114 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 ABHD14A-ACY1A0A1B0GW23 586 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 LRIT2A6NDA9 550 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 GGT3PA6NGU5 568 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR5H14A6NHG9 310 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 CD8B2A6NJW9 211 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 MARCH11A6NNE9 402 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 IDSB3KWA1 339 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 RNASEK-C17orf49H0YIS7 233 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 H0YIV9 168 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 H3BN98 237 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 CCL22O00626 93 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 TXNL1O43396 289 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 TGOLN2O43493 480 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR10H3O60404 316 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 FADS1O60427 444 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 PRAMEF11O60813 436 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 DNAJB6O75190 326 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 CXCL14O95715 111 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLC25A27O95847 323 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 NUDT3O95989 172 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 ACTL6AO96019 429 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 TRBC1P01850 177 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 C1QCP02747 245 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 MT-ND5P03915 603 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms