RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
RNF40-212ENST00000602784 SPIBQ01892 262 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 GABPB1Q06547 395 aaPredicted RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 C1DQ13901 141 aaKnown RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 GK3PQ14409 553 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 FBXW9Q5XUX1 488 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 OR2T5Q6IEZ7 315 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 TBPL2Q6SJ96 375 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 AAED1Q7RTV5 226 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 NANOGNBQ7Z5D8 188 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 SPATA24Q86W54 205 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 UEVLDQ8IX04 471 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 DMRTC2Q8IXT2 367 aaPredicted RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 GABRG1Q8N1C3 465 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 KDM8Q8N371 416 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 PAPD5Q8NDF8 572 aaKnown RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 OR2T29Q8NH02 315 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 ZNF385AQ96PM9 386 aaKnown RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 CHID1Q9BWS9 393 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 HDHD5Q9BXW7 423 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 YY1AP1Q9H869 796 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 KRCC1Q9NPI7 259 aaPredicted RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 CENPEQ02224 2701 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 FREM1Q5H8C1 2179 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 C16orf97H3BN30 126 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 TRAF3IP2O43734 574 aaPredicted RBP12.28□□□□□ -0.44
RNF40-212ENST00000602784 PIP5K1CO60331 668 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 ZNF432O94892 652 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 POU2F1P14859 743 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 PSMB1P20618 241 aaKnown RBP12.28□□□□□ -0.44
RNF40-212ENST00000602784 MAKP20794 623 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 UGT2B10P36537 528 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 IFNGR2P38484 337 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 LIMS1P48059 325 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 SEC23BQ15437 767 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 C1orf146Q5VVC0 180 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 CASP12Q6UXS9 341 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 LINC00471Q8N535 108 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 OR4K5Q8NGD3 323 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 OR52J3Q8NH60 311 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 UTP4Q969X6 686 aaKnown RBP12.28□□□□□ -0.44
RNF40-212ENST00000602784 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
RNF40-212ENST00000602784 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 CCM2LQ9NUG4 571 aaPredicted RBP12.28□□□□□ -0.44
RNF40-212ENST00000602784 MALT1Q9UDY8 824 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 TMCC3Q9ULS5 477 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 AURKCQ9UQB9 309 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 HIF3AQ9Y2N7 669 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 LYVE1Q9Y5Y7 322 aa12.28□□□□□ -0.44
RNF40-212ENST00000602784 NPIPB13A6NJU9 1138 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 NPIPB4C9JG80 1138 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 BLOC1S5-TXNDC5H3BN57 136 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 AKAP8O43823 692 aaKnown RBP12.27□□□□□ -0.45
RNF40-212ENST00000602784 CIB2O75838 187 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 SAGP10523 405 aaPredicted RBP12.27□□□□□ -0.45
RNF40-212ENST00000602784 AHCYP23526 432 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 EDNRAP25101 427 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 OMPP47874 163 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 CLDN17P56750 224 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 RPS4XP62701 263 aaKnown RBP12.27□□□□□ -0.45
RNF40-212ENST00000602784 IL1RL1Q01638 556 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 RPL18Q07020 188 aaKnown RBP12.27□□□□□ -0.45
RNF40-212ENST00000602784 EXOC3L2Q2M3D2 409 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 STAC2Q6ZMT1 411 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 MEX3BQ6ZN04 569 aaKnown RBP12.27□□□□□ -0.45
RNF40-212ENST00000602784 OAFQ86UD1 273 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 DUS3LQ96G46 650 aaKnown RBP12.27□□□□□ -0.45
RNF40-212ENST00000602784 LINC00470Q9BZP3 86 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 SLCO5A1Q9H2Y9 848 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 ASB6Q9NWX5 421 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 PRSS50Q9UI38 385 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
RNF40-212ENST00000602784 TUBAL3A6NHL2 446 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 C11orf98E9PRG8 122 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 TNFRSF11BO00300 401 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 CDC42EP2O14613 210 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 KLF4O43474 513 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 RNF13O43567 381 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 ADAP00813 363 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 CST1P01037 141 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 HLA-DOBP13765 273 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 COX6B1P14854 86 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 PPP3CBP16298 524 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 AQP2P41181 271 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 PRPS1P60891 318 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 POU3F1Q03052 451 aaPredicted RBP12.26□□□□□ -0.45
RNF40-212ENST00000602784 ITGADQ13349 1161 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 FHL1Q13642 323 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
RNF40-212ENST00000602784 TMEM123Q8N131 208 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 OR4C15Q8NGM1 316 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 SLCO4A1Q96BD0 722 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 RSRC1Q96IZ7 334 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms