RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PLK3Q9H4B4 646 aa14.76□□□□□ -0.05
SCAF1-204ENST00000601038 GPR35Q9HC97 309 aa14.76□□□□□ -0.05
SCAF1-204ENST00000601038 TCF7L2Q9NQB0 619 aa14.76□□□□□ -0.05
SCAF1-204ENST00000601038 SLAMF8Q9P0V8 285 aa14.76□□□□□ -0.05
SCAF1-204ENST00000601038 LPAR3Q9UBY5 353 aa14.76□□□□□ -0.05
SCAF1-204ENST00000601038 FBXO9Q9UK97 447 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-204ENST00000601038 IGKV1D-42A0A075B6H8 117 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 TRAV36DV7A0A075B6V5 113 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 LOC390937A0A1W2PQ73 354 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 POLR3GO15318 223 aaPredicted RBP14.75□□□□□ -0.05
SCAF1-204ENST00000601038 LMX1BO60663 402 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 ERLIN1O75477 346 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 PPIBP23284 216 aaKnown RBP14.75□□□□□ -0.05
SCAF1-204ENST00000601038 GRPRP30550 384 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 CALCRP30988 508 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 GZMKP49863 264 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 CDK6Q00534 326 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 MFSD13AQ14CX5 517 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 ALG10BQ5I7T1 473 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 FAM91A1Q658Y4 838 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 ULK3Q6PHR2 472 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 COMTD1Q86VU5 262 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 CCDC36Q8IYA8 594 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 PIK3C3Q8NEB9 887 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 NUP37Q8NFH4 326 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 SPDL1Q96EA4 605 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 FOXN4Q96NZ1 517 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 SEC61A2Q9H9S3 476 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 CRLF2Q9HC73 371 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 SLC52A3Q9NQ40 469 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 VAPAQ9P0L0 249 aa14.75□□□□□ -0.05
SCAF1-204ENST00000601038 ANK3Q12955 4377 aaKnown RBP14.74□□□□□ -0.05
SCAF1-204ENST00000601038 VSTM5A8MXK1 200 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 TRAF3IP2O43734 574 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-204ENST00000601038 AKAP8O43823 692 aaKnown RBP14.74□□□□□ -0.05
SCAF1-204ENST00000601038 TPST1O60507 370 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF16P17020 682 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-204ENST00000601038 GPX2P18283 190 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 ARR3P36575 388 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 IDH3AP50213 366 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 PPOXP50336 477 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 HGFACQ04756 655 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 GGTLC2Q14390 218 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 CEACAM16Q2WEN9 425 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 PAGE3Q5JUK9 113 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 BEND6Q5SZJ8 279 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-204ENST00000601038 VHLLQ6RSH7 139 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 PHC2Q8IXK0 858 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 TMEM123Q8N131 208 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 C10orf111Q8N326 155 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 ANKS4BQ8N8V4 417 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 ADPRHL1Q8NDY3 354 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 OR6S1Q8NH40 331 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF837Q96EG3 531 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-204ENST00000601038 SLC47A1Q96FL8 570 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 SLC41A3Q96GZ6 507 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 OR2M2Q96R28 347 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 CCDC28BQ9BUN5 200 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 SHARPINQ9H0F6 387 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 RAB1BQ9H0U4 201 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF442Q9H7R0 627 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 CCDC167Q9P0B6 97 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 KLHL14Q9P2G3 628 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 CORINQ9Y5Q5 1042 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 MALRD1Q5VYJ5 2156 aa14.74□□□□□ -0.05
SCAF1-204ENST00000601038 A0A087WUJ7 227 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 TRBV5-3A0A0A0MS03 114 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 PRORSD1PA6NEY8 169 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF99A8MXY4 864 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-204ENST00000601038 MS4A18H0YCH9 400 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 PHF1O43189 567 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-204ENST00000601038 CELA3BP08861 270 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 IDH3GP51553 393 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-204ENST00000601038 MS4A18Q3C1V0 323 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 GLIPR1L2Q4G1C9 344 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 FAM166AQ6J272 317 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF540Q8NDQ6 660 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 BHLHE22Q8NFJ8 381 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-204ENST00000601038 IL17RDQ8NFM7 739 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 LRR1Q96L50 414 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 ANKRD27Q96NW4 1050 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF607Q96SK3 696 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 EPYCQ99645 322 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 EBF4Q9BQW3 602 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 PRR14Q9BWN1 585 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 TMEM38AQ9H6F2 299 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 TMEM27Q9HBJ8 222 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 SELENONQ9NZV5 590 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 TESQ9UGI8 421 aaKnown RBP14.73□□□□□ -0.05
SCAF1-204ENST00000601038 CORO2BQ9UQ03 480 aa14.73□□□□□ -0.05
SCAF1-204ENST00000601038 IGHV2OR16-5A0A0B4J2B6 119 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 A0A0B4J2E0 115 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 A0A1B0GX12 115 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 ZNF503-AS2A6NEH8 195 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 SERPINB7O75635 380 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 APEHP13798 732 aaKnown RBP14.72□□□□□ -0.05
SCAF1-204ENST00000601038 NQO1P15559 274 aaKnown RBP14.72□□□□□ -0.05
SCAF1-204ENST00000601038 NPR2P20594 1047 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 CBLP22681 906 aa14.72□□□□□ -0.05
SCAF1-204ENST00000601038 SLC6A2P23975 617 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms