RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ANKRD17O75179 2603 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 RAI1Q7Z5J4 1906 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 LYZL6O75951 148 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 OR7A10O76100 309 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 DIRAS1O95057 198 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 HRGP04196 525 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 FUT1P19526 365 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 CRYGSP22914 178 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 PUDPQ08623 228 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 TRIM25Q14258 630 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 TRAM2Q15035 370 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 CYP2R1Q6VVX0 501 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 AAED1Q7RTV5 226 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF100Q8IYN0 542 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 SLC7A13Q8TCU3 470 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 S100PBPQ96BU1 408 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 HS6ST2Q96MM7 605 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 ASPNQ9BXN1 380 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 RASSF1Q9NS23 344 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 RCE1Q9Y256 329 aa17.18■□□□□ 0.34
SHKBP1-221ENST00000599833 A0A1W2PRQ8 180 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 hCG_2039718K7EN88 272 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 KLF4O43474 513 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 UPK3AO75631 287 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 RHCEP18577 417 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 MAKP20794 623 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 GTF2E2P29084 291 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 MAGEA2P43356 314 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 CLDN17P56750 224 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 PMS2P3Q13401 168 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 DGCR6Q14129 220 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 PHYHD1Q5SRE7 291 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 TBPL2Q6SJ96 375 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 PXKQ7Z7A4 578 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 ACOT11Q8WXI4 607 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 KISS1RQ969F8 398 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 ASB9Q96DX5 294 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 BOD1Q96IK1 185 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 TXNDC15Q96J42 360 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 OR2M2Q96R28 347 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 FNDC11Q9BVV2 318 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 HDHD5Q9BXW7 423 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 SLCO5A1Q9H2Y9 848 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 MUC13Q9H3R2 512 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 ANKRD19PQ9H560 264 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 NANSQ9NR45 359 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 PARPBPQ9NWS1 579 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 CADP27708 2225 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 CELSR1Q9NYQ6 3014 aa17.17■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF43P17038 809 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 RPS4XP62701 263 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 POU3F1Q03052 451 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 PRKCDQ05655 676 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 FAPQ12884 760 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 SEC23BQ15437 767 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 NIPAL3Q6P499 406 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 MEX3DQ86XN8 651 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 NRMQ8IXM6 262 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 C10orf53Q8N6V4 93 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 STEAP2Q8NFT2 490 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 SGTBQ96EQ0 304 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 LURAP1Q96LR2 239 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 BTBD10Q9BSF8 475 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 THTPAQ9BU02 230 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 LINC00470Q9BZP3 86 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 IL1RAPQ9NPH3 570 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 ASB6Q9NWX5 421 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 MED29Q9NX70 200 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 NDRG3Q9UGV2 375 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 MED31Q9Y3C7 131 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 NOX1Q9Y5S8 564 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 ROS1P08922 2347 aa17.16■□□□□ 0.34
SHKBP1-221ENST00000599833 TRBV4-1A0A0J9YWV2 114 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 GMNNO75496 209 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 NQO1P15559 274 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 PPP3CBP16298 524 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF26P17031 533 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 RPL18Q07020 188 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 FOXD4Q12950 439 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 TAB1Q15750 504 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 GABRA6Q16445 453 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 PODNL1Q6PEZ8 512 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 MBOAT2Q6ZWT7 520 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 BHLHA15Q7RTS1 189 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 PIWIL3Q7Z3Z3 882 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 UEVLDQ8IX04 471 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF837Q96EG3 531 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 MUS81Q96NY9 551 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 MED18Q9BUE0 208 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 CADM1Q9BY67 442 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 NELFAQ9H3P2 528 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 TAS2R16Q9NYV7 291 aa17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 C6orf203Q9P0P8 240 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-221ENST00000599833 CDC42EP2O14613 210 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 GOSR1O95249 250 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 H1F0P07305 194 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 ADORA3P0DMS8 318 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 LIMS1P48059 325 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 MTX3Q5HYI7 312 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 RNF113BQ8IZP6 322 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms