RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MICU2Q8IYU8 434 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 SMAP2Q8WU79 429 aaPredicted RBP12.43□□□□□ -0.42
LIG1-218ENST00000599322 PERPQ96FX8 193 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 TPD52L3Q96J77 140 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 ZNF583Q96ND8 569 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 NANSQ9NR45 359 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 MRPL39Q9NYK5 338 aaKnown RBP12.43□□□□□ -0.42
LIG1-218ENST00000599322 CISD1Q9NZ45 108 aaKnown RBP12.43□□□□□ -0.42
LIG1-218ENST00000599322 SLC7A7Q9UM01 511 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 LAMP3Q9UQV4 416 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 SLC25A15Q9Y619 301 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 NIPBLQ6KC79 2804 aaeCLIP12.43□□□□□ -0.42
LIG1-218ENST00000599322 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 VSTM5A8MXK1 200 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 ENTPD5O75356 428 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 ADORA3P0DMS8 318 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 FOSL1P15407 271 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 HOXB4P17483 251 aaPredicted RBP12.42□□□□□ -0.42
LIG1-218ENST00000599322 NUDT2P50583 147 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 P2RY4P51582 365 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 CDH11P55287 796 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 ADAM8P78325 824 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
LIG1-218ENST00000599322 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
LIG1-218ENST00000599322 CYBRD1Q53TN4 286 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 AGAP6Q5VW22 663 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 ANKRD16Q6P6B7 361 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 PRSS57Q6UWY2 283 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 PXKQ7Z7A4 578 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 CCDC36Q8IYA8 594 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 OR6N1Q8NGY5 312 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 OR5J2Q8NH18 312 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 SLC41A3Q96GZ6 507 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 HS6ST2Q96MM7 605 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 ALKBH3Q96Q83 286 aaPredicted RBP12.42□□□□□ -0.42
LIG1-218ENST00000599322 BDH2Q9BUT1 245 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 C1QTNF6Q9BXI9 259 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
LIG1-218ENST00000599322 A0A1W2PR80 420 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 PDLIM1O00151 329 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 RNF13O43567 381 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 TPST2O60704 377 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 SERPINI2O75830 405 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 OR5F1O95221 314 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 CH25HO95992 272 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 BGLAPP02818 100 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 THRBP10828 461 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 CD40P25942 277 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 LSP1P33241 339 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 RBM34P42696 430 aaKnown RBP12.41□□□□□ -0.42
LIG1-218ENST00000599322 SEC24CP53992 1094 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 ATP5J2P56134 94 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 GNGT1P63211 74 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 SELENOWP63302 87 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 LIPEQ05469 1076 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 Q5PR19 223 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 FKBP9P1Q75LS8 142 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 RBM45Q8IUH3 476 aaKnown RBP12.41□□□□□ -0.42
LIG1-218ENST00000599322 FBXL14Q8N1E6 418 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 KBTBD8Q8NFY9 601 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 GSX2Q9BZM3 304 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 AMBRA1Q9C0C7 1298 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 PCDHAC1Q9H158 963 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 ZNF229Q9UJW7 825 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 POFUT2Q9Y2G5 429 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 ATP23Q9Y6H3 246 aa12.41□□□□□ -0.42
LIG1-218ENST00000599322 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
LIG1-218ENST00000599322 HTR3EA5X5Y0 456 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 FAM171A2A8MVW0 826 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 KPNA4O00629 521 aaPredicted RBP12.4□□□□□ -0.42
LIG1-218ENST00000599322 PLPP3O14495 311 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 FZD7O75084 574 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 UPK3AO75631 287 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 ZNF682O95780 498 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 IFNW1P05000 195 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 PTNP21246 168 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 PRDX6P30041 224 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 CAPZA2P47755 286 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 PTH2RP49190 550 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 SLC7A2P52569 658 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 ST3GAL3Q11203 375 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 FOXD4Q12950 439 aaPredicted RBP12.4□□□□□ -0.42
LIG1-218ENST00000599322 TBRG1Q3YBR2 411 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 CARD17Q5XLA6 110 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 NANOGNBQ7Z5D8 188 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 YTHDF3Q7Z739 585 aaKnown RBP12.4□□□□□ -0.42
LIG1-218ENST00000599322 CYP4Z1Q86W10 505 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 OR1K1Q8NGR3 316 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 MAGEE2Q8TD90 523 aaPredicted RBP12.4□□□□□ -0.42
LIG1-218ENST00000599322 FAM162AQ96A26 154 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 LRR1Q96L50 414 aa12.4□□□□□ -0.42
LIG1-218ENST00000599322 ADAD1Q96M93 576 aaKnown RBP12.4□□□□□ -0.42
LIG1-218ENST00000599322 KCTD14Q9BQ13 255 aaPredicted RBP12.4□□□□□ -0.42
LIG1-218ENST00000599322 WFDC6Q9BQY6 131 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms