RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ZNF347Q96SE7 839 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 YY1AP1Q9H869 796 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 CLEC4AQ9UMR7 237 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 B3GALT5Q9Y2C3 310 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 A0A0B4J2E0 115 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 A0A1B0GX12 115 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ELOA3DA6NLF2 546 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 MGRN1O60291 552 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 TIPRLO75663 272 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 DIRAS1O95057 198 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 OR5F1O95221 314 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 NTN1O95631 604 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 CD8AP01732 235 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 MT-ND1P03886 318 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 THRBP10828 461 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 RYKP34925 604 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 IDH2P48735 452 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 GZMKP49863 264 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 HMGA2P52926 109 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 DSCR4P56555 118 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 PIN1Q13526 163 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 GANABQ14697 944 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 QPRTQ15274 297 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 TMEM44Q2T9K0 475 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 CTU2Q2VPK5 515 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 PLPPR5Q32ZL2 321 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ELOA3BQ3SY89 546 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 GLYR1Q49A26 553 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 WBP2NLQ6ICG8 309 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ZNF613Q6PF04 617 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 LILRA2Q8N149 483 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 DEPDC4Q8N2C3 294 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 TMCO5AQ8N6Q1 288 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 PIK3C3Q8NEB9 887 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ELOA3Q8NG57 546 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 OR4K17Q8NGC6 315 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ADAMTS16Q8TE57 1224 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ST8SIA1Q92185 356 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 FAM168AQ92567 244 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 C3orf49Q96BT1 292 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 CACNG6Q9BXT2 260 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 RNF122Q9H9V4 155 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 TMEM27Q9HBJ8 222 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 ACER3Q9NUN7 267 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 MED17Q9NVC6 651 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 RIMS3Q9UJD0 308 aa12.27□□□□□ -0.45
SHKBP1-218ENST00000598907 A0A087WZY1 265 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 A0A1B0GWA3 101 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 C7orf72A4D263 438 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 TRAPPC13A5PLN9 417 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 CPSF4LA6NMK7 179 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 H0YHG0 523 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 ZIC3O60481 467 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 UQCRBP14927 111 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 PRKCAP17252 672 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 FUT4P22083 530 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 USF1P22415 310 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 SRD5A2P31213 254 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 SLC1A3P43003 542 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 LIMS1P48059 325 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 CCR4P51679 360 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 SESN3P58005 492 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 DSCR9P59020 149 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 COPZ1P61923 177 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 RIPK1Q13546 671 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 GGTLC2Q14390 218 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 PON3Q15166 354 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 ATP6AP1Q15904 470 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 HIST2H2BDQ6DRA6 164 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 OR2T5Q6IEZ7 315 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 LINC00114Q6XXX2 140 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 FAM214BQ7L5A3 538 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 CYP4Z1Q86W10 505 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 OFCC1Q8IZS5 231 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 OR2T29Q8NH02 315 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 POC1BQ8TC44 478 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 STMN2Q93045 179 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 ADAD1Q96M93 576 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 NPAS1Q99742 590 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 PRSS27Q9BQR3 290 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 FUZQ9BT04 418 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 C12orf10Q9HB07 376 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 NTN4Q9HB63 628 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 MAN2C1Q9NTJ4 1040 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 DNAJB9Q9UBS3 223 aa12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 FAM32AQ9Y421 112 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-218ENST00000598907 GMFGO60234 142 aa12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 CST1P01037 141 aa12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 FCGR1AP12314 374 aa12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 FASP25445 335 aa12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 ADH6P28332 368 aa12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 SRP14P37108 136 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 CDH12P55289 794 aa12.25□□□□□ -0.45
SHKBP1-218ENST00000598907 TAS2R41P59536 307 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms