RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 FAM98BQ52LJ0 330 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 FBXW9Q5XUX1 488 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 NIPAL3Q6P499 406 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 STAC2Q6ZMT1 411 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 CCDC121Q6ZUS5 278 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 RNF113BQ8IZP6 322 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 GABRG1Q8N1C3 465 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 FAM222BQ8WU58 562 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 IL1RAPQ9NPH3 570 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 CRIM1Q9NZV1 1036 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 KCNN3Q9UGI6 736 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 NOX1Q9Y5S8 564 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 ALPK2Q86TB3 2170 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 CRYBG3Q68DQ2 2970 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 A0A087WUU8 490 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 A0A1W2PRQ8 180 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 SH3D21A4FU49 640 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 ACOT8O14734 319 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 ASAH2BP0C7U1 165 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 IL32P24001 234 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 CCKARP32238 428 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 DGCR6Q14129 220 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 FLOT2Q14254 428 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 P2RY6Q15077 328 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 IQCCQ4KMZ1 466 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 ANKRD34AQ69YU3 496 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 MBOAT2Q6ZWT7 520 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 CDK20Q8IZL9 346 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 BPIFA2Q96DR5 249 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 ZNF347Q96SE7 839 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 MED18Q9BUE0 208 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 SLCO5A1Q9H2Y9 848 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 MAGIXQ9H6Y5 334 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 GPR52Q9Y2T5 361 aa17.38■□□□□ 0.37
SHKBP1-214ENST00000597396 AQP12BA6NM10 295 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 BLOC1S5-TXNDC5H3BN57 136 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 EBAG9O00559 213 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 RNF13O43567 381 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 TRAF3IP2O43734 574 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 KRT33AO76009 404 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 GADD45GO95257 159 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 SAGP10523 405 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 HLA-DOBP13765 273 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 PSMB1P20618 241 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 SELENOPP49908 381 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 LSM11P83369 360 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 PRKCDQ05655 676 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 ZP4Q12836 540 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 FAPQ12884 760 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 ITGADQ13349 1161 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 SFRP5Q5T4F7 317 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 TSPO2Q5TGU0 170 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 PODNL1Q6PEZ8 512 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 TBPL2Q6SJ96 375 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 PIWIL3Q7Z3Z3 882 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 PXKQ7Z7A4 578 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 AQP12AQ8IXF9 295 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 POMGNT2Q8NAT1 580 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 STEAP2Q8NFT2 490 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 OR52J3Q8NH60 311 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 SLC7A13Q8TCU3 470 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 KISS1RQ969F8 398 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 DHRS1Q96LJ7 313 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 HDHD5Q9BXW7 423 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 SLC7A10Q9NS82 523 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 ASB6Q9NWX5 421 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 POMPQ9Y244 141 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 RCE1Q9Y256 329 aa17.37■□□□□ 0.37
SHKBP1-214ENST00000597396 OR6C65A6NJZ3 312 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 CASKO14936 926 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 SLC43A1O75387 559 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 LYZL6O75951 148 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 EPXP11678 715 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 IGHV1-2P23083 117 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 RRM2P31350 389 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 TSC22D1Q15714 1073 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 BHLHA15Q7RTS1 189 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 SPATA24Q86W54 205 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 MEX3DQ86XN8 651 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 ANKK1Q8NFD2 765 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 LIPHQ8WWY8 451 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 ZC3HAV1LQ96H79 300 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 DACH2Q96NX9 599 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 WFIKKN1Q96NZ8 548 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 ACTR6Q9GZN1 396 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 LRMDAQ9H2I8 198 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 MCCC2Q9HCC0 563 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 KRCC1Q9NPI7 259 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 TAS2R5Q9NYW4 299 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 MALT1Q9UDY8 824 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 TMEM5Q9Y2B1 443 aa17.36■□□□□ 0.37
SHKBP1-214ENST00000597396 ABCA12Q86UK0 2595 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 PRR14LQ5THK1 2151 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 TRBV4-1A0A0J9YWV2 114 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 CIB4A0PJX0 185 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 EFCAB9A8MZ26 197 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 PRF1P14222 555 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 PPP3CBP16298 524 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 COX5AP20674 150 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 MAKP20794 623 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms