RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 MS4A18H0YCH9 400 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 H0YJX3 145 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 TNFSF11O14788 317 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 ZNHIT1O43257 154 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 OR2T1O43869 369 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 HCN1O60741 890 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 AHSA1O95433 338 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 PMS2P2O95744 297 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 ACTL6AO96019 429 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 CRYABP02511 175 aaKnown RBP8.43□□□□□ -1.06
TRIM28-208ENST00000597172 OSMP13725 252 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF708P17019 499 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 GSTM3P21266 225 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 GRPRP30550 384 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 IDUAP35475 653 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 DIO1P49895 249 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 P2RY4P51582 365 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 H3F3AP84243 136 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 IL1RL1Q01638 556 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 OR7A5Q15622 319 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 MS4A18Q3C1V0 323 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 ZBED5Q49AG3 693 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 GXYLT1Q4G148 440 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 THSD4Q6ZMP0 1018 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 Q6ZPB1 254 aaPredicted RBP8.43□□□□□ -1.06
TRIM28-208ENST00000597172 RASSF6Q6ZTQ3 369 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 FGD2Q7Z6J4 655 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 CHERPQ8IWX8 916 aaKnown RBP8.43□□□□□ -1.06
TRIM28-208ENST00000597172 PARP8Q8N3A8 854 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 C10orf53Q8N6V4 93 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 LRRC75AQ8NAA5 344 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 OR8D4Q8NGM9 314 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 OR51A7Q8NH64 312 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 TMEM158Q8WZ71 300 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 SMPDL3BQ92485 455 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 OSTF1Q92882 214 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 WDYHV1Q96HA8 205 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 KLHL15Q96M94 604 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 PLA2G12AQ9BZM1 189 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 VCX3BQ9H321 246 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 TOR3AQ9H497 397 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 LDAHQ9H6V9 325 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 EGLN3Q9H6Z9 239 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 FKRPQ9H9S5 495 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF556Q9HAH1 456 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 NANSQ9NR45 359 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 TAS2R5Q9NYW4 299 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 IL20Q9NYY1 176 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 KIF17Q9P2E2 1029 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF229Q9UJW7 825 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 EDARQ9UNE0 448 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 PLEKHA6Q9Y2H5 1048 aa8.43□□□□□ -1.06
TRIM28-208ENST00000597172 GJE1A6NN92 205 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF814B7Z6K7 855 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 M0R082 166 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SULT2B1O00204 365 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 PLPP3O14495 311 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 AQP7O14520 342 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 EIF1AYO14602 144 aaKnown RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 AKR7A3O95154 331 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SOX14O95416 240 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 MT-ATP6P00846 226 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SAGP10523 405 aaPredicted RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 CPN1P15169 458 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 UQCRC1P31930 480 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 AQP2P41181 271 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SLC9A3P48764 834 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 AGFG1P52594 562 aaKnown RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 CRISP1P54107 249 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 RAD23AP54725 363 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 OR2B6P58173 313 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 RPS4XP62701 263 aaKnown RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 ADARB1P78563 741 aaKnown RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 HSF1Q00613 529 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 RBPJQ06330 500 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 NPRL3Q12980 569 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 C3AR1Q16581 482 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 RFX4Q33E94 735 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SLC36A3Q495N2 470 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 IZUMO2Q6UXV1 221 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 NHLRC1Q6VVB1 395 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF620Q6ZNG0 422 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 ESPNLQ6ZVH7 1005 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 H1FNTQ75WM6 255 aaPredicted RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 OAFQ86UD1 273 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 TMEM99Q8N816 258 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 OR5J2Q8NH18 312 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 OR2V1Q8NHB1 315 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 MOSPD2Q8NHP6 518 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF417Q8TAU3 575 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 DNAJC9Q8WXX5 260 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SAMD8Q96LT4 415 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 GPR137Q96N19 417 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 ZNF587Q96SQ5 575 aaPredicted RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 TACO1Q9BSH4 297 aaKnown RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 GABARAPL3Q9BY60 117 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 SRXN1Q9BYN0 137 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 GRIP2Q9C0E4 1043 aa8.42□□□□□ -1.06
TRIM28-208ENST00000597172 KRCC1Q9NPI7 259 aaPredicted RBP8.42□□□□□ -1.06
TRIM28-208ENST00000597172 FAM118AQ9NWS6 357 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms