RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CDH11P55287 796 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 SH3BGRP55822 239 aaPredicted RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 SLC25A3Q00325 362 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ROR2Q01974 943 aaKnown RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 LGALS3BPQ08380 585 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 NPTX1Q15818 432 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 C3orf36Q3SXR2 165 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 HIKESHIQ53FT3 197 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 RABL3Q5HYI8 236 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ENTPD8Q5MY95 495 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 HMBOX1Q6NT76 420 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ERICH5Q6P6B1 374 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 KLHL24Q6TFL4 600 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 CLEC9AQ6UXN8 241 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 LINGO2Q7L985 606 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 UEVLDQ8IX04 471 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 PCYOX1LQ8NBM8 494 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 PIK3C3Q8NEB9 887 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 OR4D11Q8NGI4 311 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 OR1K1Q8NGR3 316 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 SLC26A7Q8TE54 656 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 GTPBP3Q969Y2 492 aaKnown RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 MPP4Q96JB8 637 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 LRR1Q96L50 414 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF583Q96ND8 569 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 OR2M2Q96R28 347 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 SMR3AQ99954 134 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 DHRS9Q9BPW9 319 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ASPNQ9BXN1 380 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ALG2Q9H553 416 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 FKRPQ9H9S5 495 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 MOV10Q9HCE1 1003 aaKnown RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 NOX1Q9Y5S8 564 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 RAI1Q7Z5J4 1906 aaPredicted RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 PRR14LQ5THK1 2151 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 TRAPPC13A5PLN9 417 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 TRIM64A6NGJ6 449 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 TRIM64BA6NI03 449 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 PLPP3O14495 311 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 TRAF3IP2O43734 574 aaPredicted RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 AKAP8O43823 692 aaKnown RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 HPRP00739 348 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 IFNA14P01570 189 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 THY1P04216 161 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 NQO1P15559 274 aaKnown RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 CBLP22681 906 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 PMS2P3Q13401 168 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 TBRG1Q3YBR2 411 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 REP15Q6BDI9 236 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF544Q6NX49 715 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 PXKQ7Z7A4 578 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 SNX32Q86XE0 403 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 RBM45Q8IUH3 476 aaKnown RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 CCDC36Q8IYA8 594 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 C20orf196Q8IYI0 205 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 TMEM123Q8N131 208 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 GPR137CQ8N3F9 429 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 RP9Q8TA86 221 aaKnown RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 ADAMTS16Q8TE57 1224 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 C10orf82Q8WW14 230 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF426Q9BUY5 554 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 SLC19A3Q9BZV2 496 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 BARX1Q9HBU1 254 aaPredicted RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 CBLN4Q9NTU7 201 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 CRNNQ9UBG3 495 aaPredicted RBP9.19□□□□□ -0.94
CCDC9-203ENST00000596938 POU2F3Q9UKI9 436 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 BAG5Q9UL15 447 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 AP3M1Q9Y2T2 418 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
CCDC9-203ENST00000596938 CPSF4LA6NMK7 179 aaKnown RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 LRRN3E7EW58 273 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 CCDC22O60826 627 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 HEXAP06865 529 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 HLA-DOBP13765 273 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 APOBEC3AP31941 199 aaPredicted RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 CDKN1AP38936 164 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 FABP6P51161 128 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 UBE2NP61088 152 aaKnown RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 ARF1P84077 181 aaKnown RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 PUDPQ08623 228 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 SPOCK1Q08629 439 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 ZP4Q12836 540 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 SF3A3Q12874 501 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 CLEC12BQ2HXU8 276 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 C11orf71Q6IPW1 123 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 TTC33Q6PID6 262 aaPredicted RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 B3GLCTQ6Y288 498 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 WDR88Q6ZMY6 472 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 DNM1P46Q6ZS02 220 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 TSPYL5Q86VY4 417 aaPredicted RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 FBXL14Q8N1E6 418 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 MUC15Q8N387 334 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 C10orf53Q8N6V4 93 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 OR5J2Q8NH18 312 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 VANGL1Q8TAA9 524 aaPredicted RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 PROX1Q92786 737 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms