RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ALKBH3Q96Q83 286 aaPredicted RBP12.82□□□□□ -0.36
VRK3-206ENST00000594090 FNDC11Q9BVV2 318 aa12.82□□□□□ -0.36
VRK3-206ENST00000594090 MAN2C1Q9NTJ4 1040 aa12.82□□□□□ -0.36
VRK3-206ENST00000594090 C20orf141Q9NUB4 165 aa12.82□□□□□ -0.36
VRK3-206ENST00000594090 RHCGQ9UBD6 479 aa12.82□□□□□ -0.36
VRK3-206ENST00000594090 MED31Q9Y3C7 131 aa12.82□□□□□ -0.36
VRK3-206ENST00000594090 ENPP4Q9Y6X5 453 aa12.82□□□□□ -0.36
VRK3-206ENST00000594090 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 OR5H1A6NKK0 313 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 KLF4O43474 513 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 AKAP8O43823 692 aaKnown RBP12.81□□□□□ -0.36
VRK3-206ENST00000594090 PIP5K1CO60331 668 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 KRT33AO76009 404 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 OR7A10O76100 309 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 UMPSP11172 480 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 AHCYP23526 432 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 MPGP29372 298 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 LGALS3BPQ08380 585 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 TRAM2Q15035 370 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 BEX5Q5H9J7 111 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 C9orf135Q5VTT2 229 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 SEZ6L2Q6UXD5 910 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 ABHD12BQ7Z5M8 362 aaPredicted RBP12.81□□□□□ -0.36
VRK3-206ENST00000594090 TSEN54Q7Z6J9 526 aaKnown RBP12.81□□□□□ -0.36
VRK3-206ENST00000594090 PXKQ7Z7A4 578 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 C1orf162Q8NEQ5 155 aaPredicted RBP12.81□□□□□ -0.36
VRK3-206ENST00000594090 SGTBQ96EQ0 304 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 OR2M2Q96R28 347 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 LINC00470Q9BZP3 86 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 PLEKHF2Q9H8W4 249 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 NOX1Q9Y5S8 564 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 V9GYQ6 96 aa12.81□□□□□ -0.36
VRK3-206ENST00000594090 ZNF587BE7ETH6 402 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 SLC43A1O75387 559 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 UPK3AO75631 287 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 UBOX5O94941 541 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 OR6A2O95222 327 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 HIST1H2ABP04908 130 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 ZP4Q12836 540 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 PPA1Q15181 289 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 GABRA6Q16445 453 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 NHLRC1Q6VVB1 395 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 HIST3H2AQ7L7L0 130 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 LINGO2Q7L985 606 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 NANOGNBQ7Z5D8 188 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 P2RY8Q86VZ1 359 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 CYP4Z1Q86W10 505 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 TMEM123Q8N131 208 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 HIST1H2ACQ93077 130 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 PLPPR2Q96GM1 343 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 LIME1Q9H400 295 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 MED29Q9NX70 200 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 NDUFAF4Q9P032 175 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 PRPF19Q9UMS4 504 aaKnown RBP12.8□□□□□ -0.36
VRK3-206ENST00000594090 ABCA12Q86UK0 2595 aa12.8□□□□□ -0.36
VRK3-206ENST00000594090 hCG_2039718K7EN88 272 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 SERPINI2O75830 405 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 SEMG1P04279 462 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 NR1H2P55055 460 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
VRK3-206ENST00000594090 VLDLRP98155 873 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 TGFBR3Q03167 851 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 SSX8Q7RTT4 187 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 LIPHQ8WWY8 451 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 MUCL1Q96DR8 90 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 PYURFQ96I23 114 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 MUS81Q96NY9 551 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 EMC6Q9BV81 110 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 C1orf21Q9H246 121 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
VRK3-206ENST00000594090 NGBQ9NPG2 151 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 TAS2R5Q9NYW4 299 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 TAS2R1Q9NYW7 299 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 ACTR3BQ9P1U1 418 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 PDZD2O15018 2839 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
VRK3-206ENST00000594090 CSMD1Q96PZ7 3565 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 SLC35F4A4IF30 521 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 RNF13O43567 381 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 PDE5AO76074 875 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 IFI30P13284 250 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 IFNGR1P15260 489 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 RHCEP18577 417 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 FUT1P19526 365 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 ROR2Q01974 943 aaKnown RBP12.79□□□□□ -0.36
VRK3-206ENST00000594090 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
VRK3-206ENST00000594090 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 ZNF730Q6ZMV8 503 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 WDFY1Q8IWB7 410 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 NRMQ8IXM6 262 aa12.79□□□□□ -0.36
VRK3-206ENST00000594090 GPR137CQ8N3F9 429 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms