RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 CARTPTQ16568 116 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 TRIM61Q5EBN2 209 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 PHF19Q5T6S3 580 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 ZNF517Q6ZMY9 492 aaPredicted RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 HIST3H2AQ7L7L0 130 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 SLC16A9Q7RTY1 509 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 LRRC28Q86X40 367 aaPredicted RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 PPP1R3BQ86XI6 285 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 ZBTB8BQ8NAP8 495 aaPredicted RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 NFAM1Q8NET5 270 aaPredicted RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 HIST1H2ACQ93077 130 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 PTDSS2Q9BVG9 487 aa17.86■□□□□ 0.45
CLIP3-206ENST00000593074 CCDC86Q9H6F5 360 aaKnown RBP17.86■□□□□ 0.45
CLIP3-206ENST00000593074 TRBV2A0A0J9YWF9 115 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 GATBO75879 557 aaKnown RBP17.85■□□□□ 0.45
CLIP3-206ENST00000593074 MT-ATP6P00846 226 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 POLR2HP52434 150 aaKnown RBP17.85■□□□□ 0.45
CLIP3-206ENST00000593074 OR2B6P58173 313 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 OVCH1Q7RTY7 1134 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 UBQLNLQ8IYU4 475 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 TSSK2Q96PF2 358 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 GFM1Q96RP9 751 aaKnown RBP17.85■□□□□ 0.45
CLIP3-206ENST00000593074 MFRPQ9BY79 579 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 CYSLTR2Q9NS75 346 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 PPIEQ9UNP9 301 aaKnown RBP17.85■□□□□ 0.45
CLIP3-206ENST00000593074 RASD1Q9Y272 281 aa17.85■□□□□ 0.45
CLIP3-206ENST00000593074 LINC00854A0A1B0GVQ3 168 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 FAM171A2A8MVW0 826 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 PLA2G10O15496 165 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 GPRIN2O60269 458 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 NPIPB7O75200 414 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 ARL6IP5O75915 188 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 WISP1O95388 367 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 UCHL1P09936 223 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 EDNRAP25101 427 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 DUSP3P51452 185 aaPredicted RBP17.84■□□□□ 0.45
CLIP3-206ENST00000593074 QPRTQ15274 297 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 TIGD4Q8IY51 512 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 GPR119Q8TDV5 335 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 METTL21AQ8WXB1 218 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 NPFFR2Q9Y5X5 522 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 PRR32B1ATL7 298 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 FAM25AB3EWG3 89 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 FAM25CB3EWG5 89 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 FAM25GB3EWG6 89 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 DCTN6O00399 190 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 ALOX12BO75342 701 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 SLC25A12O75746 678 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 RAB3BP20337 219 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 CBX3Q13185 183 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 CLPPQ16740 277 aaPredicted RBP17.84■□□□□ 0.45
CLIP3-206ENST00000593074 C1QL3Q5VWW1 255 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 TRIQKQ629K1 86 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 POMZP3Q6PJE2 187 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 TRILQ7L0X0 811 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 GRINAQ7Z429 371 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 RAB43Q86YS6 212 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 MISPQ8IVT2 679 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 ZNF511Q8NB15 262 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 OR2T4Q8NH00 348 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 RNF166Q96A37 237 aaPredicted RBP17.84■□□□□ 0.45
CLIP3-206ENST00000593074 MESP1Q9BRJ9 268 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 TAS2R5Q9NYW4 299 aa17.84■□□□□ 0.45
CLIP3-206ENST00000593074 EXPH5Q8NEV8 1989 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 TMED7-TICAM2A0A0A6YYA0 188 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 SUSD5O60279 629 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 ONECUT2O95948 504 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 GRPRP30550 384 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 EMP2P54851 167 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 SLC26A5P58743 744 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 EFR3AQ14156 821 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 SGCBQ16585 318 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 ZNF385CQ66K41 422 aaPredicted RBP17.83■□□□□ 0.45
CLIP3-206ENST00000593074 SLC23A3Q6PIS1 610 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 PRR23CQ6ZRP0 262 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 MAMDC2Q7Z304 686 aaPredicted RBP17.83■□□□□ 0.45
CLIP3-206ENST00000593074 BPHLQ86WA6 291 aaPredicted RBP17.83■□□□□ 0.45
CLIP3-206ENST00000593074 EGFL6Q8IUX8 553 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 NUBPLQ8TB37 319 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 OCIAD1Q9NX40 245 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 EXTL2Q9UBQ6 330 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 FBXO4Q9UKT5 387 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 ZNF346Q9UL40 294 aaKnown RBP17.83■□□□□ 0.45
CLIP3-206ENST00000593074 TMED7Q9Y3B3 224 aa17.83■□□□□ 0.45
CLIP3-206ENST00000593074 H7C1C5 153 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 SYPP08247 313 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 LCN6P62502 163 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 SLC25A35Q3KQZ1 300 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 FAM69AQ5T7M9 428 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 SLC6A19Q695T7 634 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 IL20RBQ6UXL0 311 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 UNQ9370/PRO34162Q6UXP9 181 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 ADGRG3Q86Y34 549 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 RDH10Q8IZV5 341 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 KCNJ15Q99712 375 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 PDCD1LG2Q9BQ51 273 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 GTPBP2Q9BX10 602 aaKnown RBP17.83■□□□□ 0.44
CLIP3-206ENST00000593074 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.83■□□□□ 0.44
CLIP3-206ENST00000593074 ZCCHC4Q9H5U6 513 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 APMAPQ9HDC9 416 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms