RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	GRINA	Q7Z429	371 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	GALNT5	Q7Z7M9	940 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	ATG4D	Q86TL0	474 aa	Predicted RBP	13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	CDK20	Q8IZL9	346 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	DHRSX	Q8N5I4	330 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	FADS6	Q8N9I5	356 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	WDSUB1	Q8N9V3	476 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	OR1J4	Q8NGS1	313 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	GNPDA2	Q8TDQ7	276 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	NIPSNAP1	Q9BPW8	284 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	ADI1	Q9BV57	179 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	DGCR6L	Q9BY27	220 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	ADAM19	Q9H013	955 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	RIBC2	Q9H4K1	309 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960		Q9H521	79 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	GALNT8	Q9NY28	637 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	NDRG3	Q9UGV2	375 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	ENOPH1	Q9UHY7	261 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	TMEM5	Q9Y2B1	443 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	LRRC42	Q9Y546	428 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	AP4B1	Q9Y6B7	739 aa		13.44	□□□□□ -0.26
PKN1-215	ENST00000592960	MED12L	Q86YW9	2145 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960		A8MXE2	369 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	KPNA4	O00629	521 aa	Predicted RBP	13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	DLGAP1	O14490	977 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	SMPD2	O60906	423 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	IFI30	P13284	250 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	GSTM3	P21266	225 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	CXCR1	P25024	350 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	PCSK6	P29122	969 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	POLR2H	P52434	150 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	LSM11	P83369	360 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	MERTK	Q12866	999 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	LINC00114	Q6XXX2	140 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	ZER1	Q7Z7L7	766 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	ZNF555	Q8NEP9	628 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	CYGB	Q8WWM9	190 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	WNT2B	Q93097	391 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	FAM46A	Q96IP4	442 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	TM9SF2	Q99805	663 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	ZNF426	Q9BUY5	554 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	PIGM	Q9H3S5	423 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	TOR3A	Q9H497	397 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	MED17	Q9NVC6	651 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	OSGIN1	Q9UJX0	560 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	FBXL2	Q9UKC9	423 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	VDAC3	Q9Y277	283 aa		13.43	□□□□□ -0.26
PKN1-215	ENST00000592960	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960		B4DXG7	233 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	ACADS	P16219	412 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	PRKCA	P17252	672 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	CAPG	P40121	348 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	OMP	P47874	163 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	PRKCD	Q05655	676 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	COX10	Q12887	443 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	C6orf52	Q5T4I8	152 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	PFN4	Q8NHR9	129 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	ZNF524	Q96C55	264 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	C1GALT1C1	Q96EU7	318 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	DTNBP1	Q96EV8	351 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960		Q96MF0	132 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	MBOAT4	Q96T53	435 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	TUBA1C	Q9BQE3	449 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	TMEM43	Q9BTV4	400 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	SLC19A3	Q9BZV2	496 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	DKKL1	Q9UK85	242 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	TMED7	Q9Y3B3	224 aa		13.42	□□□□□ -0.26
PKN1-215	ENST00000592960	USF3	Q68DE3	2245 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960		A0A087WZY1	265 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	CBR3	O75828	277 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	CCNA2	P20248	432 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	FPR3	P25089	353 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	DPP4	P27487	766 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	APOBEC1	P41238	236 aa	Known RBP	13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	GPR4	P46093	362 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	CTBP2	P56545	445 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	DSCR4	P56555	118 aa	Predicted RBP	13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	FOXF1	Q12946	379 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	TSPAN31	Q12999	210 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	ACKR1	Q16570	336 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	PLPPR5	Q32ZL2	321 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	SLC25A53	Q5H9E4	307 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	TTC23	Q5W5X9	447 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	KLHL17	Q6TDP4	642 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	LUZP2	Q86TE4	346 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	MEX3D	Q86XN8	651 aa	Known RBP	13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	PARP8	Q8N3A8	854 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	ZBTB8A	Q96BR9	441 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	BPIFA2	Q96DR5	249 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	MRGPRX4	Q96LA9	322 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	GABARAPL3	Q9BY60	117 aa		13.41	□□□□□ -0.26
PKN1-215	ENST00000592960	DSCAM	O60469	2012 aa		13.4	□□□□□ -0.26
PKN1-215	ENST00000592960	DEFB108A	A8MXU0	73 aa		13.4	□□□□□ -0.26
PKN1-215	ENST00000592960		H0YAE9	185 aa		13.4	□□□□□ -0.26
PKN1-215	ENST00000592960	SIAH2	O43255	324 aa		13.4	□□□□□ -0.26
PKN1-215	ENST00000592960	OSM	P13725	252 aa		13.4	□□□□□ -0.26
PKN1-215	ENST00000592960	HK1	P19367	917 aa		13.4	□□□□□ -0.26

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