RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 FOXD4Q12950 439 aaPredicted RBP13.79□□□□□ -0.2
LIG3-215ENST00000592690 ACKR1Q16570 336 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 DEFB113Q30KQ7 82 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 OR7E24Q6IFN5 339 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 NHLRC1Q6VVB1 395 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 SPNS3Q6ZMD2 512 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 CBLL1Q75N03 491 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 WDFY1Q8IWB7 410 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 RNF148Q8N7C7 305 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 WDR31Q8NA23 367 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 C1orf162Q8NEQ5 155 aaPredicted RBP13.79□□□□□ -0.2
LIG3-215ENST00000592690 KBTBD8Q8NFY9 601 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 PFN4Q8NHR9 129 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 TMEM255BQ8WV15 326 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 LZICQ8WZA0 190 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 MBD6Q96DN6 1003 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 LINC00470Q9BZP3 86 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 POLR2J2Q9GZM3 115 aaKnown RBP13.79□□□□□ -0.2
LIG3-215ENST00000592690 POLR2J3Q9H1A7 115 aaKnown RBP13.79□□□□□ -0.2
LIG3-215ENST00000592690 CXXC4Q9H2H0 198 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
LIG3-215ENST00000592690 EGFL7Q9UHF1 273 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 RNF115Q9Y4L5 304 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 SNX13Q9Y5W8 968 aa13.79□□□□□ -0.2
LIG3-215ENST00000592690 ZNF587BE7ETH6 402 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 C11orf98E9PRG8 122 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 NDUFAB1O14561 156 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 SERPINI2O75830 405 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 SERPINA1P01009 418 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 CD3EP07766 207 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 YAP1P46937 504 aaKnown RBP13.78□□□□□ -0.2
LIG3-215ENST00000592690 HIKESHIQ53FT3 197 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 ADAM5Q6NVV9 412 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 SLC46A3Q7Z3Q1 461 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 FAM156AQ8NDB6 213 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 RBM15BQ8NDT2 890 aaKnown RBP13.78□□□□□ -0.2
LIG3-215ENST00000592690 LILRB1Q8NHL6 650 aaPredicted RBP13.78□□□□□ -0.2
LIG3-215ENST00000592690 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 FAM162AQ96A26 154 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 HSH2DQ96JZ2 352 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 PRRC1Q96M27 445 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 OR2M2Q96R28 347 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 EMC6Q9BV81 110 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 SLC19A3Q9BZV2 496 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 FKRPQ9H9S5 495 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 NANSQ9NR45 359 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 SLC17A5Q9NRA2 495 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 MED29Q9NX70 200 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 FAM53CQ9NYF3 392 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 ADA2Q9NZK5 511 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 TAGLN3Q9UI15 199 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 ARID1AO14497 2285 aa13.78□□□□□ -0.2
LIG3-215ENST00000592690 ITPR3Q14573 2671 aa13.77□□□□□ -0.2
LIG3-215ENST00000592690 OR6C65A6NJZ3 312 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 J3KTA2 159 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 PIP5K1CO60331 668 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 SLC43A1O75387 559 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 MT-ND1P03886 318 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 ADORA3P0DMS8 318 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 UMPSP11172 480 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 HIVEP1P15822 2718 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 AHCYP23526 432 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 RBM34P42696 430 aaKnown RBP13.77□□□□□ -0.21
LIG3-215ENST00000592690 ZNF83P51522 516 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 ROR2Q01974 943 aaKnown RBP13.77□□□□□ -0.21
LIG3-215ENST00000592690 TGFBR3Q03167 851 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 IFI44LQ53G44 452 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 PHYHD1Q5SRE7 291 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 CARD17Q5XLA6 110 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 C20orf204Q6ZNR8 217 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 ABHD12BQ7Z5M8 362 aaPredicted RBP13.77□□□□□ -0.21
LIG3-215ENST00000592690 PGAM4Q8N0Y7 254 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 C17orf78Q8N4C9 275 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 ANKS4BQ8N8V4 417 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 OR1K1Q8NGR3 316 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 TMEM239Q8WW34 195 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 GEMIN6Q8WXD5 167 aaKnown RBP13.77□□□□□ -0.21
LIG3-215ENST00000592690 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
LIG3-215ENST00000592690 TXNDC15Q96J42 360 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 CCL19Q99731 98 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 C1QTNF6Q9BXI9 259 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 C20orf141Q9NUB4 165 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 PLCE1Q9P212 2302 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 ZNF229Q9UJW7 825 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 NOX1Q9Y5S8 564 aa13.77□□□□□ -0.21
LIG3-215ENST00000592690 TEP1Q99973 2627 aaKnown RBP13.76□□□□□ -0.21
LIG3-215ENST00000592690 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 ABCD4O14678 606 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 HS3ST1O14792 307 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 AKAP8O43823 692 aaKnown RBP13.76□□□□□ -0.21
LIG3-215ENST00000592690 IFNW1P05000 195 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 THRBP10828 461 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 SPOCK1Q08629 439 aa13.76□□□□□ -0.21
LIG3-215ENST00000592690 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms