RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 AGAP6Q5VW22 663 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 HMBOX1Q6NT76 420 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 ZNF613Q6PF04 617 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 LINC00114Q6XXX2 140 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 TSPYL5Q86VY4 417 aaPredicted RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 ADPRHL1Q8NDY3 354 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 SLC26A7Q8TE54 656 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 BCL2L2Q92843 193 aaPredicted RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 SLC41A3Q96GZ6 507 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 MOGAT1Q96PD6 335 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 TMEM43Q9BTV4 400 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 NELFAQ9H3P2 528 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 FAIMQ9NVQ4 179 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 GDF2Q9UK05 429 aaPredicted RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 ALPK2Q86TB3 2170 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 CR1P17927 2039 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 A0A096LPE4 126 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 LOC102725191A0A1B0GVB3 256 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 A0A1W2PPZ6 126 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 BBIP1A8MTZ0 92 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 ATP6V1G2-DDX39BF2Z307 99 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 CHP2O43745 196 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 SLC43A1O75387 559 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 LYPD3O95274 346 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 THY1P04216 161 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 HEXAP06865 529 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 HLA-DOBP13765 273 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 TUBA1BP68363 451 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 TUBA4AP68366 448 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 TNK1Q13470 666 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 VEZF1Q14119 521 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 MFSD13AQ14CX5 517 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 CLEC12BQ2HXU8 276 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 C1QTNF12Q5T7M4 302 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 WDR88Q6ZMY6 472 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 TUBA1AQ71U36 451 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 CALHM3Q86XJ0 350 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 C10orf53Q8N6V4 93 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 SCAIQ8N9R8 606 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 OR8J3Q8NGG0 315 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 OR2M2Q96R28 347 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 SH3GL1Q99961 368 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 ECSITQ9BQ95 431 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 ASPNQ9BXN1 380 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 CCDC134Q9H6E4 229 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 MRGBPQ9NV56 204 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 CORINQ9Y5Q5 1042 aa12.12□□□□□ -0.47
APOC1-208ENST00000592535 ARPC4-TTLL3A0A0A6YYG9 625 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 IGHV1-18A0A0C4DH31 117 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 LOC100653049A0A140TA62 436 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 RPL36A-HNRNPH2H7BZ11 118 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 AKAP8O43823 692 aaKnown RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 KRT34O76011 436 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 ACVR1BP36896 505 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 FABP6P51161 128 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 UBE2NP61088 152 aaKnown RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 ARF1P84077 181 aaKnown RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 POU3F1Q03052 451 aaPredicted RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 PMS2P3Q13401 168 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 ETFDHQ16134 617 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 PHYHD1Q5SRE7 291 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 CARD17Q5XLA6 110 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 C11orf71Q6IPW1 123 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 ANKRD16Q6P6B7 361 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 WDFY1Q8IWB7 410 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 TMEM123Q8N131 208 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 MUC15Q8N387 334 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 GPR137CQ8N3F9 429 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 PIK3C3Q8NEB9 887 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 MAGEE2Q8TD90 523 aaPredicted RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 ADAMTS16Q8TE57 1224 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 TXNDC15Q96J42 360 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 EMC6Q9BV81 110 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 CACNG6Q9BXT2 260 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 GPR35Q9HC97 309 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 CBLN4Q9NTU7 201 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 MED29Q9NX70 200 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 MRPL39Q9NYK5 338 aaKnown RBP12.11□□□□□ -0.47
APOC1-208ENST00000592535 SLC7A7Q9UM01 511 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 MOKQ9UQ07 419 aa12.11□□□□□ -0.47
APOC1-208ENST00000592535 NF1P21359 2839 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 TRAPPC13A5PLN9 417 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 M0R3G1 203 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 PLPP3O14495 311 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms