RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 A8MVM7 634 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 EEF1E1-BLOC1S5C9J1V9 151 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 H3BUI4 141 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 SULT2B1O00204 365 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 EEF1E1O43324 174 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 EFNA2O43921 213 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 TMEM127O75204 238 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 IL18BPO95998 194 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 STSP08842 583 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 PNMTP11086 282 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 UMPSP11172 480 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CPN1P15169 458 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 KLK2P20151 261 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CBLP22681 906 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 PTGER4P35408 488 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 RPS5P46782 204 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 DIO1P49895 249 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 NUP107P57740 925 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CSNK2A1P68400 391 aaPredicted RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 VLDLRP98155 873 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CD83Q01151 205 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MS4A2Q01362 244 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CHRNB3Q05901 458 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 SF3B4Q15427 424 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ZSCAN26Q16670 478 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CTU2Q2VPK5 515 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 FAM209BQ5JX69 171 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 C1orf140Q5VVS0 124 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MTFR2Q6P444 385 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CD300LDQ6UXZ3 194 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 WDR88Q6ZMY6 472 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 GDF7Q7Z4P5 450 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ADGRG3Q86Y34 549 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ZDHHC21Q8IVQ6 265 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MCEMP1Q8IX19 187 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MARVELD2Q8N4S9 558 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CNEP1R1Q8N9A8 125 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 DTX3Q8N9I9 347 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 C9orf106Q8NAJ2 232 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 PFN4Q8NHR9 129 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ABHD3Q8WU67 409 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 TMEM255BQ8WV15 326 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 SLC38A4Q969I6 547 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CPNE4Q96A23 557 aaPredicted RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 SLC25A36Q96CQ1 311 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 PYURFQ96I23 114 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ADGRG7Q96K78 797 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ARL5BQ96KC2 179 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 RAB3IPQ96QF0 476 aaPredicted RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 EPYCQ99645 322 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 FNDC11Q9BVV2 318 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 AMBRA1Q9C0C7 1298 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 POLR2J2Q9GZM3 115 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 POLR2J3Q9H1A7 115 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 GORASP2Q9H8Y8 452 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MBNL3Q9NUK0 354 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CLCF1Q9UBD9 225 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 RIMS3Q9UJD0 308 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CLEC4AQ9UMR7 237 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 PLA2G2DQ9UNK4 145 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 POMPQ9Y244 141 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ZNF835Q9Y2P0 537 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MEMO1Q9Y316 297 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 FAM32AQ9Y421 112 aaKnown RBP5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ZNF175Q9Y473 711 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 ENPP4Q9Y6X5 453 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 CACNA1CQ13936 2221 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 MYO7BQ6PIF6 2116 aa5.72□□□□□ -1.49
VPS4B-205ENST00000591383 COL12A1Q99715 3063 aa5.71□□□□□ -1.49
VPS4B-205ENST00000591383 MED12LQ86YW9 2145 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 IGKV1D-42A0A075B6H8 117 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 TRAV36DV7A0A075B6V5 113 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 AHRRA9YTQ3 701 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 E9PLN8 166 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 ACOT8O14734 319 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 SMAD9O15198 467 aaKnown RBP5.71□□□□□ -1.5
VPS4B-205ENST00000591383 ADAMDEC1O15204 470 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF208O43345 1280 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 ZG16O60844 167 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 SEMA7AO75326 666 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 SERPINI2O75830 405 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 PMS2P2O95744 297 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 TGM6O95932 706 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 GPIP06744 558 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 H1F0P07305 194 aaKnown RBP5.71□□□□□ -1.5
VPS4B-205ENST00000591383 TMIGD3P0DMS9 266 aaPredicted RBP5.71□□□□□ -1.5
VPS4B-205ENST00000591383 NQO1P15559 274 aaKnown RBP5.71□□□□□ -1.5
VPS4B-205ENST00000591383 ITGA2P17301 1181 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 CTSSP25774 331 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 SLC6A9P48067 706 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 UGT2B15P54855 530 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 DLX5P56178 289 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 CTBP2P56545 445 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 CARD18P57730 90 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 SLC35A1P78382 337 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 CD69Q07108 199 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 PMPCAQ10713 525 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 ST3GAL3Q11203 375 aa5.71□□□□□ -1.5
VPS4B-205ENST00000591383 TRAP1Q12931 704 aaKnown RBP5.71□□□□□ -1.5
VPS4B-205ENST00000591383 TRAM2Q15035 370 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms