RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 OR52N5Q8NH56 324 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 FOXC2Q99958 501 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 PRSS27Q9BQR3 290 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 TMEM204Q9BSN7 226 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 SLC19A3Q9BZV2 496 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 AMBRA1Q9C0C7 1298 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 ESRP2Q9H6T0 727 aaKnown RBP8.08□□□□□ -1.12
DNMT1-223ENST00000591239 FKRPQ9H9S5 495 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 UBTD1Q9HAC8 227 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 MEPEQ9NQ76 525 aaPredicted RBP8.08□□□□□ -1.12
DNMT1-223ENST00000591239 NANSQ9NR45 359 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 ARL8BQ9NVJ2 186 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 FAM53CQ9NYF3 392 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 ADA2Q9NZK5 511 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 TAGLN3Q9UI15 199 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 RCE1Q9Y256 329 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 NOX1Q9Y5S8 564 aa8.08□□□□□ -1.12
DNMT1-223ENST00000591239 ZNF469Q96JG9 3925 aaPredicted RBP8.08□□□□□ -1.12
DNMT1-223ENST00000591239 A0A1W2PR80 420 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 DPRXA6NFQ7 191 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 ZNF587BE7ETH6 402 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 TRAF3IP2O43734 574 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 SLC43A1O75387 559 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 UPK3AO75631 287 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 FAM107AO95990 144 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 SERPINA1P01009 418 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 MT-ND1P03886 318 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 CD3EP07766 207 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 ADORA3P0DMS8 318 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 THRBP10828 461 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 NCK1P16333 377 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 CDH2P19022 906 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 AHCYP23526 432 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 RBM34P42696 430 aaKnown RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 POU3F1Q03052 451 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 BSPH1Q075Z2 132 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 FOXD4Q12950 439 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 DEFB113Q30KQ7 82 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 GKAP1Q5VSY0 366 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 NHLRC1Q6VVB1 395 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 SPNS3Q6ZMD2 512 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 FKBP9P1Q75LS8 142 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 CBLL1Q75N03 491 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 LINGO2Q7L985 606 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 PXKQ7Z7A4 578 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 TMEM123Q8N131 208 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 LRRC17Q8N6Y2 441 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 RNF148Q8N7C7 305 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 C1orf162Q8NEQ5 155 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 TMEM255BQ8WV15 326 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 TMEM239Q8WW34 195 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 GEMIN6Q8WXD5 167 aaKnown RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 FAM162AQ96A26 154 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 HS6ST2Q96MM7 605 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 ALKBH3Q96Q83 286 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-223ENST00000591239 ALPK1Q96QP1 1244 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 OR2M2Q96R28 347 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 LINC00470Q9BZP3 86 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 CXXC4Q9H2H0 198 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 SLC17A5Q9NRA2 495 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 TAS2R5Q9NYW4 299 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 NPAP1Q9NZP6 1156 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 EGFL7Q9UHF1 273 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 ZNF229Q9UJW7 825 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 A4GNTQ9UNA3 340 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 RNF115Q9Y4L5 304 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 SNX13Q9Y5W8 968 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 SLC25A15Q9Y619 301 aa8.07□□□□□ -1.12
DNMT1-223ENST00000591239 PRRC2AP48634 2157 aaKnown RBP8.06□□□□□ -1.12
DNMT1-223ENST00000591239 ALPK2Q86TB3 2170 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 C11orf98E9PRG8 122 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 RPL36A-HNRNPH2H7BZ11 118 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 HS3ST1O14792 307 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 CLOCKO15516 846 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 AKAP8O43823 692 aaKnown RBP8.06□□□□□ -1.12
DNMT1-223ENST00000591239 OR6A2O95222 327 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 IGF2P01344 180 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 HIST1H2ABP04908 130 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 IFNW1P05000 195 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 ASAH2BP0C7U1 165 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 UMPSP11172 480 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 TCN1P20061 433 aaPredicted RBP8.06□□□□□ -1.12
DNMT1-223ENST00000591239 HOXC12P31275 282 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 IFNA8P32881 189 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 YAP1P46937 504 aaKnown RBP8.06□□□□□ -1.12
DNMT1-223ENST00000591239 ZNF83P51522 516 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 MNAT1P51948 309 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 UGT2B15P54855 530 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 SLC25A3Q00325 362 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 ROR2Q01974 943 aaKnown RBP8.06□□□□□ -1.12
DNMT1-223ENST00000591239 ST3GAL3Q11203 375 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 ZP4Q12836 540 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 KRT72Q14CN4 511 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 IFI44LQ53G44 452 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 GLYATQ6IB77 296 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 HMBOX1Q6NT76 420 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 TMEM108Q6UXF1 575 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 C20orf204Q6ZNR8 217 aa8.06□□□□□ -1.12
DNMT1-223ENST00000591239 HIST3H2AQ7L7L0 130 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms