RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ZP4Q12836 540 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 GK3PQ14409 553 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 PXKQ7Z7A4 578 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 LUZP2Q86TE4 346 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 OAFQ86UD1 273 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 STK32CQ86UX6 486 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 EPHX4Q8IUS5 362 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 ZNF100Q8IYN0 542 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 LINC00471Q8N535 108 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 ZIC4Q8N9L1 334 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 ZNF610Q8N9Z0 462 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 JKAMPQ9P055 326 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 SPTAN1Q13813 2472 aaKnown RBP16.98■□□□□ 0.31
DDX39A-214ENST00000590556 CDC42EP2O14613 210 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 CLOCKO15516 846 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 HNRNPRO43390 633 aaKnown RBP16.98■□□□□ 0.31
DDX39A-214ENST00000590556 RNF13O43567 381 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 DEAF1O75398 565 aaPredicted RBP16.98■□□□□ 0.31
DDX39A-214ENST00000590556 AQP2P41181 271 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 OR3A2P47893 321 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 POU3F1Q03052 451 aaPredicted RBP16.98■□□□□ 0.31
DDX39A-214ENST00000590556 RPL18Q07020 188 aaKnown RBP16.98■□□□□ 0.31
DDX39A-214ENST00000590556 CASP12Q6UXS9 341 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 AAED1Q7RTV5 226 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 ZER1Q7Z7L7 766 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 ANKK1Q8NFD2 765 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 OR13C2Q8NGS9 318 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 OR51A7Q8NH64 312 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 TMEM45BQ96B21 275 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 LRRC46Q96FV0 321 aa16.98■□□□□ 0.31
DDX39A-214ENST00000590556 ZNF385AQ96PM9 386 aaKnown RBP16.98■□□□□ 0.31
DDX39A-214ENST00000590556 FREM1Q5H8C1 2179 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 UNC119BA6NIH7 251 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 A8MXE2 369 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 E2F6O75461 281 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 SERPINI2O75830 405 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 TSPAN19P0C672 248 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 HLA-DOBP13765 273 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 DNAJA1P31689 397 aaKnown RBP16.97■□□□□ 0.31
DDX39A-214ENST00000590556 NTF4P34130 210 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 CLDN17P56750 224 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 LAPTM4AQ15012 233 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 MICAQ29983 383 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 ANKDD1AQ495B1 522 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 PGBD2Q6P3X8 592 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 TFAP2EQ6VUC0 442 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.97■□□□□ 0.31
DDX39A-214ENST00000590556 MOSPD2Q8NHP6 518 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 GNPDA2Q8TDQ7 276 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 PYDC1Q8WXC3 89 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 APH1AQ96BI3 265 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 TNFRSF13CQ96RJ3 184 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 RBM24Q9BX46 236 aaKnown RBP16.97■□□□□ 0.31
DDX39A-214ENST00000590556 FANCFQ9NPI8 374 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 HIF3AQ9Y2N7 669 aa16.97■□□□□ 0.31
DDX39A-214ENST00000590556 KLF2Q9Y5W3 355 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-214ENST00000590556 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 USP9YO00507 2555 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-214ENST00000590556 TRAV27A0A087WT01 109 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 A1L4Q6 167 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 ANKRD65E5RJM6 399 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 KLF4O43474 513 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 TRAF3IP2O43734 574 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-214ENST00000590556 AKAP8O43823 692 aaKnown RBP16.96■□□□□ 0.31
DDX39A-214ENST00000590556 FCGR1AP12314 374 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 FASP25445 335 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 UQCRC1P31930 480 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 IST1P53990 364 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 ATP6AP1Q15904 470 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 FBXL19-AS1Q494R0 122 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 ZBED5Q49AG3 693 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 C1orf94Q6P1W5 598 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 ZFP1Q6P2D0 407 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 ZNF474Q6S9Z5 364 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-214ENST00000590556 OR9Q2Q8NGE9 314 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 GIPC3Q8TF64 312 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 GPA33Q99795 319 aa16.96■□□□□ 0.31
DDX39A-214ENST00000590556 A0A1W2PRG6 482 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 ENTPD5O75356 428 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 CLDN1O95832 211 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 F13BP05160 661 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 FPR3P25089 353 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 EDNRAP25101 427 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 RPS4XP62701 263 aaKnown RBP16.95■□□□□ 0.3
DDX39A-214ENST00000590556 TFF3Q07654 80 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 ALG10Q5BKT4 473 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 ZNF770Q6IQ21 691 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-214ENST00000590556 NIPAL3Q6P499 406 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 NHLRC1Q6VVB1 395 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 BEND4Q6ZU67 534 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 SLC35D2Q76EJ3 337 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 TMEM179BQ7Z7N9 219 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 OR10G2Q8NGC3 310 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 RNASE6Q93091 150 aaKnown RBP16.95■□□□□ 0.3
DDX39A-214ENST00000590556 TXNDC15Q96J42 360 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 NDEL1Q9GZM8 345 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 MCCC2Q9HCC0 563 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 INIPQ9NRY2 104 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 MED29Q9NX70 200 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 PRSS50Q9UI38 385 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms