RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 HTRA1Q92743 480 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 TP53INP1Q96A56 240 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 SMIM19Q96E16 107 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ZMYND19Q96E35 227 aaPredicted RBP9.05□□□□□ -0.96
VPS25-202ENST00000589219 DIRAS2Q96HU8 199 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 SNX18Q96RF0 628 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 UBL7Q96S82 380 aaPredicted RBP9.05□□□□□ -0.96
VPS25-202ENST00000589219 MNTQ99583 582 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ATF6BQ99941 703 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 TTYH2Q9BSA4 534 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 SEMA4CQ9C0C4 833 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ADAM19Q9H013 955 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 RNF32Q9H0A6 362 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 NPAP1Q9NZP6 1156 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ST6GALNAC2Q9UJ37 374 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 HSPB2A8KAH6 182 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 OGG1O15527 345 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 LRRTM2O43300 516 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SEC14L5O43304 696 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 TLX3O43711 291 aaPredicted RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 TMCC2O75069 709 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 TMEM127O75204 238 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SLC25A12O75746 678 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SC5DO75845 299 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 GATBO75879 557 aaKnown RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 ARL6IP5O75915 188 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 ONECUT2O95948 504 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 HLA-DQB1P01920 261 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 TFP02787 698 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 HIST1H2ABP04908 130 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 GYPBP06028 91 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 CXCR1P25024 350 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 ABCD3P28288 659 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 EVI2BP34910 448 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 TGM4P49221 684 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 P2RX1P51575 399 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 POLR2HP52434 150 aaKnown RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 EFNA3P52797 238 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SLC26A5P58743 744 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 ERVK-25P63136 954 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 HSPB2Q16082 182 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 PRAMEF17Q5VTA0 474 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SLC6A19Q695T7 634 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 RPL22L1Q6P5R6 122 aaKnown RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 LEG1Q6P5S2 330 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 CBLN3Q6UW01 205 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 APOOLQ6UXV4 268 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 HIST3H2AQ7L7L0 130 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 FAM122BQ7Z309 247 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 PXKQ7Z7A4 578 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 PRR22Q8IZ63 422 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 LRRC17Q8N6Y2 441 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 OR6S1Q8NH40 331 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 MOSPD2Q8NHP6 518 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 NUBPLQ8TB37 319 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 STT3BQ8TCJ2 826 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 HIST1H2ACQ93077 130 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 RASD2Q96D21 266 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 PGLYRP3Q96LB9 341 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 DDOQ99489 341 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SLC22A4Q9H015 551 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 KLHL1Q9NR64 748 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 CTSFQ9UBX1 484 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 FBXL4Q9UKA2 621 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 RARRES3Q9UL19 164 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 PPIEQ9UNP9 301 aaKnown RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 ADAM18Q9Y3Q7 739 aa9.04□□□□□ -0.96
VPS25-202ENST00000589219 SIRT4Q9Y6E7 314 aaPredicted RBP9.04□□□□□ -0.96
VPS25-202ENST00000589219 ASXL3Q9C0F0 2248 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 TRAV1-2A0A0B4J238 106 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 LY6G6EA0A0G2JKS1 128 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 A0A1W2PQ09 198 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 LRRN3E7EW58 273 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 PHYHO14832 338 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 FADS1O60427 444 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 ALOX12BO75342 701 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 TRIM3O75382 744 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 RENP00797 406 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 BGLAPP02818 100 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 HEXBP07686 556 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 AZGP1P25311 298 aaKnown RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 ITPKBP27987 946 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 PYCR1P32322 319 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 AQP2P41181 271 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 NAA10P41227 235 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 HTR3AP46098 478 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 GDI2P50395 445 aaKnown RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 OR12D2P58182 307 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 CTXN1P60606 82 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 EGR4Q05215 589 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 SLC3A1Q07837 685 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 NKAIN1Q4KMZ8 207 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 PYDC2Q56P42 97 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 CDCP2Q5VXM1 449 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 TRIQKQ629K1 86 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms