RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 UCK2Q9BZX2 261 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 INIPQ9NRY2 104 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 COQ3Q9NZJ6 369 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 SIGLEC7Q9Y286 467 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
VMP1-203ENST00000586245 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
VMP1-203ENST00000586245 POLEQ07864 2286 aa12.13□□□□□ -0.47
VMP1-203ENST00000586245 NBASA2RRP1 2371 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 A0A0G2JNJ9 132 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 A0A1W2PRG6 482 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 SERPINI2O75830 405 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 NDUFB2O95178 105 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 F13BP05160 661 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 TSPAN19P0C672 248 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 AGTR1P30556 359 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 UQCRC1P31930 480 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 RPL4P36578 427 aaKnown RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 SMSP52788 366 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 POU3F1Q03052 451 aaPredicted RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 RPL13AP3Q6NVV1 102 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 SMARCD3Q6STE5 483 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 RASSF6Q6ZTQ3 369 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 CREB3L2Q70SY1 520 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 MOSPD2Q8NHP6 518 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 FANK1Q8TC84 345 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 CIB1Q99828 191 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 SFXN3Q9BWM7 321 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 MCCC2Q9HCC0 563 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 FANCFQ9NPI8 374 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 B3GAT1Q9P2W7 334 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 Q9UFV3 132 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 ING1Q9UK53 422 aaPredicted RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 NOSIPQ9Y314 301 aaKnown RBP12.12□□□□□ -0.47
VMP1-203ENST00000586245 FLVCR1Q9Y5Y0 555 aa12.12□□□□□ -0.47
VMP1-203ENST00000586245 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 KIAA1549Q9HCM3 1950 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 MCIDASD6RGH6 385 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 PDLIM1O00151 329 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 PTP4A3O75365 173 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 HPRP00739 348 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 OPRM1P35372 400 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 CTXN1P60606 82 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 FOXF2Q12947 444 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 FAHD1Q6P587 224 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 ZNF620Q6ZNG0 422 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 EPHX4Q8IUS5 362 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 NAXEQ8NCW5 288 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 OR52L1Q8NGH7 329 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 OR6K3Q8NGY3 331 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 ASB5Q8WWX0 329 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 EME1Q96AY2 570 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 RBM4BQ9BQ04 359 aaKnown RBP12.11□□□□□ -0.47
VMP1-203ENST00000586245 RBM4Q9BWF3 364 aaKnown RBP12.11□□□□□ -0.47
VMP1-203ENST00000586245 OSBPL10Q9BXB5 764 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 KRT84Q9NSB2 600 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
VMP1-203ENST00000586245 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
VMP1-203ENST00000586245 RNF6Q9Y252 685 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 CDH10Q9Y6N8 788 aa12.11□□□□□ -0.47
VMP1-203ENST00000586245 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 H3BN98 237 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 DVL2O14641 736 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 MRPL33O75394 65 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 IL18BPO95998 194 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 BCL10O95999 233 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 CHRNB4P30926 498 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 SLC6A6P31641 620 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 KIR2DL2P43627 348 aaPredicted RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 DAPP51397 102 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 CLDN17P56750 224 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 ADORA2A-AS1P86434 159 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 FHL1Q13642 323 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 TRIP10Q15642 601 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 RFX4Q33E94 735 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 NIPAL3Q6P499 406 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 KLHL17Q6TDP4 642 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 CASP12Q6UXS9 341 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 AAED1Q7RTV5 226 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
VMP1-203ENST00000586245 HDDC2Q7Z4H3 204 aa12.1□□□□□ -0.47
VMP1-203ENST00000586245 IGFN1Q86VF2 1251 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms