RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 DEFB126Q9BYW3 111 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 RTN4RQ9BZR6 473 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 APMAPQ9HDC9 416 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 ABCB10Q9NRK6 738 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 ETAA1Q9NY74 926 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 PLEKHB1Q9UF11 243 aaPredicted RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 PCDHGA5Q9Y5G8 931 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 PCNX3Q9H6A9 2034 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 IGLV3-32A0A0A0MS00 114 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 TMEM72A0PK05 275 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 CD8B2A6NJW9 211 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 HSPB2A8KAH6 182 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 FAM47E-STBD1D6RA91 191 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 PHYHO14832 338 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 FLRT2O43155 660 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 TBX1O43435 398 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 GPRIN2O60269 458 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 OR6A2O95222 327 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 PTTG1O95997 202 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 IGHMP01871 453 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 TFP02787 698 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 TACSTD2P09758 323 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 FBXO45P0C2W1 286 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 CD8BP10966 210 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 PTBP1P26599 531 aaKnown RBP eCLIP10.21□□□□□ -0.77
LIG3-204ENST00000585740 CCKBRP32239 447 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 CDKN2AP42771 156 aaKnown RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 RPS5P46782 204 aaKnown RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 BLVRAP53004 296 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 FBXW4P57775 412 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 IFITM3Q01628 133 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 CDC20Q12834 499 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 TOMM34Q15785 309 aaPredicted RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 HSPB2Q16082 182 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 LPAL2Q16609 132 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 GXYLT1Q4G148 440 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 C1orf140Q5VVS0 124 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 SLC6A19Q695T7 634 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 DMKNQ6E0U4 476 aaPredicted RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 ARL9Q6T311 187 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 METAP1DQ6UB28 335 aaPredicted RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 TMEM91Q6ZNR0 172 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 ADGRG3Q86Y34 549 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 EXD3Q8N9H8 876 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 OR2I1PQ8NGU4 316 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 OR6K6Q8NGW6 343 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 SETD6Q8TBK2 473 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 ASB15Q8WXK1 588 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 PHYHIPQ92561 330 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 MR1Q95460 341 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
LIG3-204ENST00000585740 HDHD5Q9BXW7 423 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 TPK1Q9H3S4 243 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 RERGLQ9H628 205 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 CPNE5Q9HCH3 593 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 INIPQ9NRY2 104 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 FBXL4Q9UKA2 621 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 TMEM14AQ9Y6G1 99 aa10.21□□□□□ -0.77
LIG3-204ENST00000585740 ETV2O00321 342 aaPredicted RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 XKRYO14609 159 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ADAM10O14672 748 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 TP53I11O14683 189 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZNF208O43345 1280 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 GATBO75879 557 aaKnown RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 DXOO77932 396 aaKnown RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 APOA1P02647 267 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 CLEC2LP0C7M8 214 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 PYCR1P32322 319 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 NAA10P41227 235 aaPredicted RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 TGM4P49221 684 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 BCAP31P51572 246 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 OR12D2P58182 307 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZP4Q12836 540 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 CDK5R1Q15078 307 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 NTRK2Q16620 822 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 LINC01590Q5TEZ4 76 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 RALGAPA1Q6GYQ0 2036 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 XKRXQ6PP77 449 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 DBX2Q6ZNG2 339 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 TRILQ7L0X0 811 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZNF554Q86TJ5 538 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 DND1Q8IYX4 353 aaKnown RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 SCAIQ8N9R8 606 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 SYT14Q8NB59 555 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZNF248Q8NDW4 579 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ABHD4Q8TB40 342 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 M1APQ8TC57 530 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 DDIT4LQ96D03 193 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 SMIM19Q96E16 107 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 TSPAN32Q96QS1 320 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 PTDSS2Q9BVG9 487 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 POTEKPQ9BYX7 375 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZNF700Q9H0M5 742 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 TXNIPQ9H3M7 391 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ABCB9Q9NP78 766 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 QPCTLQ9NXS2 382 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 SLC39A1Q9NY26 324 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 MRPL39Q9NYK5 338 aaKnown RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 KLRF1Q9NZS2 232 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms