RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 AHSA1O95433 338 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 BCHEP06276 602 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 LYNX1P0DP58 116 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 IFNGR1P15260 489 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 ITGA2P17301 1181 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 DVL1P1P54792 670 aaPredicted RBP12.48□□□□□ -0.41
SDF2-202ENST00000585428 DSTNP60981 165 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 HOXC5Q00444 222 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 DAG1Q14118 895 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 MSMPQ1L6U9 139 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 RPS26P11Q5JNZ5 115 aaPredicted RBP12.48□□□□□ -0.41
SDF2-202ENST00000585428 ATG16L1Q676U5 607 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 C6orf89Q6UWU4 347 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 DEF8Q6ZN54 512 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 MDP1Q86V88 176 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 MEX3DQ86XN8 651 aaKnown RBP12.48□□□□□ -0.41
SDF2-202ENST00000585428 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 TAAR8Q969N4 342 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 ARMC7Q9H6L4 198 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 THUMPD1Q9NXG2 353 aaKnown RBP12.48□□□□□ -0.41
SDF2-202ENST00000585428 A0A0A6YYJ9 748 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 ZNF99A8MXY4 864 aaPredicted RBP12.47□□□□□ -0.41
SDF2-202ENST00000585428 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 MS4A18H0YCH9 400 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 OR2T1O43869 369 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 SLC22A3O75751 556 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 ZNF35P13682 527 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 COL8A2P25067 703 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 EPHA3P29320 983 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 SRP14P37108 136 aaKnown RBP12.47□□□□□ -0.41
SDF2-202ENST00000585428 BST1Q10588 318 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 MS4A18Q3C1V0 323 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 ZNF311Q5JNZ3 666 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 ELFN2Q5R3F8 820 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
SDF2-202ENST00000585428 ZNF627Q7L945 461 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 NET1Q7Z628 596 aaPredicted RBP12.47□□□□□ -0.41
SDF2-202ENST00000585428 TMEM123Q8N131 208 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 GPR137CQ8N3F9 429 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 LSMEM1Q8N8F7 131 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 PIK3C3Q8NEB9 887 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 TMEM19Q96HH6 336 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 LRR1Q96L50 414 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 ZBTB18Q99592 522 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 C12orf10Q9HB07 376 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 NOX3Q9HBY0 568 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 BCL2L10Q9HD36 194 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 CMAHPQ9Y471 501 aa12.47□□□□□ -0.41
SDF2-202ENST00000585428 B4DSR2 109 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 HDAC3O15379 428 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 RGS16O15492 202 aaPredicted RBP12.46□□□□□ -0.41
SDF2-202ENST00000585428 SYNGR3O43761 229 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 RUNX1T1Q06455 604 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 NPRL3Q12980 569 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 C1DQ13901 141 aaKnown RBP12.46□□□□□ -0.41
SDF2-202ENST00000585428 KRT71Q3SY84 523 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 GTDC1Q4AE62 458 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 PDCD4Q53EL6 469 aaKnown RBP12.46□□□□□ -0.41
SDF2-202ENST00000585428 FAM69AQ5T7M9 428 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 WDR93Q6P2C0 686 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 MREGQ8N565 214 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 ZFAND2BQ8WV99 257 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
SDF2-202ENST00000585428 VPS33AQ96AX1 596 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 SLC41A3Q96GZ6 507 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 MRPL37Q9BZE1 423 aaKnown RBP12.46□□□□□ -0.41
SDF2-202ENST00000585428 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 REV1Q9UBZ9 1251 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 USP22Q9UPT9 525 aa12.46□□□□□ -0.41
SDF2-202ENST00000585428 IGKV1D-42A0A075B6H8 117 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 M0R082 166 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 AIM2O14862 343 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 TRAF3IP2O43734 574 aaPredicted RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 SNNO75324 88 aaPredicted RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 VENTXO95231 258 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 HLA-HP01893 362 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 BMP2P12643 396 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 IDO1P14902 403 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 ZNF14P17017 642 aaPredicted RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 CFPP27918 469 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 SNTB2Q13425 540 aaKnown RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 RGNQ15493 299 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 SLC9B1Q4ZJI4 515 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 KRT80Q6KB66 452 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 C5orf46Q6UWT4 87 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 CARM1Q86X55 608 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 ZNF417Q8TAU3 575 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 MAELQ96JY0 434 aaKnown RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 ZNF587Q96SQ5 575 aaPredicted RBP12.45□□□□□ -0.42
SDF2-202ENST00000585428 TPK1Q9H3S4 243 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 DYNLRB1Q9NP97 96 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 SDR39U1Q9NRG7 319 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms