RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MEPEQ9NQ76 525 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-215ENST00000584944 MAN2C1Q9NTJ4 1040 aa12.33□□□□□ -0.44
TRAF4-215ENST00000584944 C20orf141Q9NUB4 165 aa12.33□□□□□ -0.44
TRAF4-215ENST00000584944 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-215ENST00000584944 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-215ENST00000584944 PDZD2O15018 2839 aa12.33□□□□□ -0.44
TRAF4-215ENST00000584944 IGKV3D-15A0A087WSY6 115 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 SH3PXD2BA1X283 911 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 PLPP3O14495 311 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 TNFSF13O75888 250 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 PRSS23O95084 383 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 CD8BP10966 210 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 KLK2P20151 261 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 FASP25445 335 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 SLC9A3P48764 834 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 SLC16A1P53985 500 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 CLDN17P56750 224 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 PRPS1P60891 318 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
TRAF4-215ENST00000584944 ANKDD1AQ495B1 522 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 ZFP1Q6P2D0 407 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 VWA1Q6PCB0 445 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 BEND4Q6ZU67 534 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 ABHD12BQ7Z5M8 362 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-215ENST00000584944 PXKQ7Z7A4 578 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 KDM8Q8N371 416 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 LRRC17Q8N6Y2 441 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 OR51A7Q8NH64 312 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 STARD4Q96DR4 205 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 BDH2Q9BUT1 245 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 OPN3Q9H1Y3 402 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-215ENST00000584944 KIF17Q9P2E2 1029 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 DNAJB9Q9UBS3 223 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 SEC14L4Q9UDX3 406 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
TRAF4-215ENST00000584944 AKAP9Q99996 3911 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 UNC119BA6NIH7 251 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF716A6NP11 495 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF814B7Z6K7 855 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 CLOCKO15516 846 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 RAMP1O60894 148 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 SLC43A1O75387 559 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 TIPRLO75663 272 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 PEX19P40855 299 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 DAP3P51398 398 aaKnown RBP12.31□□□□□ -0.44
TRAF4-215ENST00000584944 ACTR3P61158 418 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 CCNIQ14094 377 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 ALG10Q5BKT4 473 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 NIPAL3Q6P499 406 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 CREB3L2Q70SY1 520 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 TSEN54Q7Z6J9 526 aaKnown RBP12.31□□□□□ -0.44
TRAF4-215ENST00000584944 LIX1LQ8IVB5 337 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 GNPDA2Q8TDQ7 276 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 B3GAT2Q9NPZ5 323 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 PLSCR4Q9NRQ2 329 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 INIPQ9NRY2 104 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 STX18Q9P2W9 335 aaKnown RBP12.31□□□□□ -0.44
TRAF4-215ENST00000584944 FLVCR1Q9Y5Y0 555 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 LYVE1Q9Y5Y7 322 aa12.31□□□□□ -0.44
TRAF4-215ENST00000584944 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-215ENST00000584944 PHF3Q92576 2039 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 DCHS2Q6V1P9 2916 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 BCL10O95999 233 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 ASAH2BP0C7U1 165 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 POU2F1P14859 743 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 MAKP20794 623 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 DNAJA1P31689 397 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 AQP2P41181 271 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 OR3A2P47893 321 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 RPL18Q07020 188 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 POU4F3Q15319 338 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 SEC23BQ15437 767 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 ZBED5Q49AG3 693 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 CARD17Q5XLA6 110 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 TMPRSS11FQ6ZWK6 438 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 SLC46A3Q7Z3Q1 461 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 NUFIP2Q7Z417 695 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 LSRQ86X29 649 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 GPR137CQ8N3F9 429 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF610Q8N9Z0 462 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 POMGNT2Q8NAT1 580 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 RELL2Q8NC24 303 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 OR52L1Q8NGH7 329 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 OR13C2Q8NGS9 318 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 OR6N1Q8NGY5 312 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 GIPC3Q8TF64 312 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 RNASE6Q93091 150 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 UTP4Q969X6 686 aaKnown RBP12.3□□□□□ -0.44
TRAF4-215ENST00000584944 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 POLQO75417 2590 aa12.3□□□□□ -0.44
TRAF4-215ENST00000584944 TRAV27A0A087WT01 109 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 LOC102725191A0A1B0GVB3 256 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms