RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 A0A096LNT2 108 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 A0A1W2PR80 420 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 ARPC2O15144 300 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 GPRIN2O60269 458 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 RAD51DO75771 328 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 DIO1P49895 249 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 ENTPD8Q5MY95 495 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 HMBOX1Q6NT76 420 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 DEF8Q6ZN54 512 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 PHC2Q8IXK0 858 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 LSMEM1Q8N8F7 131 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 BTBD10Q9BSF8 475 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 CISD1Q9NZ45 108 aaKnown RBP13.77□□□□□ -0.21
SKA2-209ENST00000583976 SELENONQ9NZV5 590 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 MAGEL2Q9UJ55 1249 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 PRPF19Q9UMS4 504 aaKnown RBP13.77□□□□□ -0.21
SKA2-209ENST00000583976 SNX13Q9Y5W8 968 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 V9GYQ6 96 aa13.77□□□□□ -0.21
SKA2-209ENST00000583976 ZC3H12DA2A288 527 aaKnown RBP13.76□□□□□ -0.21
SKA2-209ENST00000583976 ELOA3DA6NLF2 546 aaPredicted RBP13.76□□□□□ -0.21
SKA2-209ENST00000583976 RNF212BA8MTL3 300 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 SSX4O60224 188 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 TP53P04637 393 aaPredicted RBP13.76□□□□□ -0.21
SKA2-209ENST00000583976 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
SKA2-209ENST00000583976 ELOA3BQ3SY89 546 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 SPATS1Q496A3 300 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 DNAL1Q4LDG9 190 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 ALG10BQ5I7T1 473 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 CYP2R1Q6VVX0 501 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 TSPYL5Q86VY4 417 aaPredicted RBP13.76□□□□□ -0.21
SKA2-209ENST00000583976 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 ELOA3Q8NG57 546 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 OR52N5Q8NH56 324 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
SKA2-209ENST00000583976 DDIT4LQ96D03 193 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 HSH2DQ96JZ2 352 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 NSMCE2Q96MF7 247 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 CACNG6Q9BXT2 260 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 RPS6KA6Q9UK32 745 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 B3GALT5Q9Y2C3 310 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 ALPK2Q86TB3 2170 aa13.76□□□□□ -0.21
SKA2-209ENST00000583976 OR5H1A6NKK0 313 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 SULT2B1O00204 365 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 FMO6PO60774 539 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 YAP1P46937 504 aaKnown RBP13.75□□□□□ -0.21
SKA2-209ENST00000583976 ZNF83P51522 516 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 CDH12P55289 794 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 FXNQ16595 210 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 IFI44LQ53G44 452 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 TIMM23BQ5SRD1 257 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 C11orf71Q6IPW1 123 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 ZNF100Q8IYN0 542 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 ZNF433Q8N7K0 673 aaPredicted RBP13.75□□□□□ -0.21
SKA2-209ENST00000583976 FAM86B1Q8N7N1 296 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 ADAMTS16Q8TE57 1224 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 DNAJA4Q8WW22 397 aaPredicted RBP13.75□□□□□ -0.21
SKA2-209ENST00000583976 CCDC124Q96CT7 223 aaKnown RBP13.75□□□□□ -0.21
SKA2-209ENST00000583976 SLC47A1Q96FL8 570 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 DCAF13Q9NV06 445 aaKnown RBP13.75□□□□□ -0.21
SKA2-209ENST00000583976 PRDM4Q9UKN5 801 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 SLC7A7Q9UM01 511 aa13.75□□□□□ -0.21
SKA2-209ENST00000583976 A0A0B4J2E0 115 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 A0A1B0GX12 115 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 ZNF716A6NP11 495 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 E7EQL1 145 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 ZNF208O43345 1280 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 TLX2O43763 284 aaPredicted RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 DNAJC8O75937 253 aaPredicted RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 ATP5HO75947 161 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 THY1P04216 161 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 FKBP2P26885 142 aaKnown RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 NTF4P34130 210 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 NUDT6P53370 316 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 OR2B6P58173 313 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 TAS2R41P59536 307 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 MS4A2Q01362 244 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 PIN1Q13526 163 aaPredicted RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 TRIM25Q14258 630 aaKnown RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 ZNF613Q6PF04 617 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 TMPPEQ6ZT21 453 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 GALNT5Q7Z7M9 940 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 GEMIN6Q8WXD5 167 aaKnown RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 SLC38A4Q969I6 547 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 AMBRA1Q9C0C7 1298 aa13.74□□□□□ -0.21
SKA2-209ENST00000583976 SAMD4AQ9UPU9 718 aaKnown RBP13.74□□□□□ -0.21
SKA2-209ENST00000583976 IGKV3D-15A0A087WSY6 115 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 TRAPPC13A5PLN9 417 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 A8MVM7 634 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 J3KTA2 159 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 GSC2O15499 205 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 IFNW1P05000 195 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 PNMTP11086 282 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 IMPDH2P12268 514 aa13.73□□□□□ -0.21
SKA2-209ENST00000583976 ATP6V1B2P21281 511 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms