RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 CREB3L2Q70SY1 520 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SERPINA11Q86U17 422 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 TREML1Q86YW5 311 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 PHC2Q8IXK0 858 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 DPP10Q8N608 796 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 BBS10Q8TAM1 723 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SLC38A5Q8WUX1 472 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 C3orf49Q96BT1 292 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SLC25A36Q96CQ1 311 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SORCS2Q96PQ0 1159 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 VRK1Q99986 396 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SPATA9Q9BWV2 254 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 BEX2Q9BXY8 128 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SLC52A3Q9NQ40 469 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 CA10Q9NS85 328 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 ARL8BQ9NVJ2 186 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 TMEM160Q9NX00 188 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 KCNS2Q9ULS6 477 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 RCE1Q9Y256 329 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 IFT52Q9Y366 437 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 PCDHB14Q9Y5E9 798 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 USF3Q68DE3 2245 aa7.6□□□□□ -1.19
CDK5RAP3-229ENST00000583697 ARPC4-TTLL3A0A0A6YYG9 625 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 B9A039 149 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 CLIC1O00299 241 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 FBP2O00757 339 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 PHF1O43189 567 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 LMX1BO60663 402 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SLC43A1O75387 559 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 F12P00748 615 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 IGHV4-31P0DP07 118 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 PRG2P13727 222 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 APEHP13798 732 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 PPIBP23284 216 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 ACAA2P42765 397 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 CAPZA2P47755 286 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 RASSF2P50749 326 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 MVDP53602 400 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 CLDN17P56750 224 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 TUBA1BP68363 451 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 TUBA4AP68366 448 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 ROR2Q01974 943 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 FADDQ13158 208 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 MAPK11Q15759 364 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 REP15Q6BDI9 236 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 FAM166AQ6J272 317 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 ANKRD16Q6P6B7 361 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 C5orf46Q6UWT4 87 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 TUBA1AQ71U36 451 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 GPR137CQ8N3F9 429 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 MFSD8Q8NHS3 518 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 RCN3Q96D15 328 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 BOD1Q96IK1 185 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 HOPXQ9BPY8 73 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 LINC00470Q9BZP3 86 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 PAIP1Q9H074 479 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SLC6A13Q9NSD5 602 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 NDE1Q9NXR1 346 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 SLAMF8Q9P0V8 285 aa7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 FBXO9Q9UK97 447 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-229ENST00000583697 A0A096LPE4 126 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 A0A1W2PPZ6 126 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 LOC390937A0A1W2PQ73 354 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 VSTM5A8MXK1 200 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 OR2T1O43869 369 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NPIPB7O75200 414 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 UPK3AO75631 287 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 UBOX5O94941 541 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 OR4A8P0C604 315 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 CECR9P0C854 216 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NQO1P15559 274 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 SRD5A1P18405 259 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 SERPINF1P36955 418 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NR4A2P43354 598 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 PPOXP50336 477 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NUDT2P50583 147 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 IDH3GP51553 393 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 P2RY4P51582 365 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NAAAQ02083 359 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 LGALS3BPQ08380 585 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NPRL3Q12980 569 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 C1DQ13901 141 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 RGNQ15493 299 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 SWI5Q1ZZU3 235 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 TRMT5Q32P41 509 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 C3orf36Q3SXR2 165 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 IQCCQ4KMZ1 466 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 RUNDC3AQ59EK9 446 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 ALG10BQ5I7T1 473 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 LRIF1Q5T3J3 769 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 FAM69AQ5T7M9 428 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 NANOGP8Q6NSW7 305 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 C6orf89Q6UWU4 347 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 C16orf89Q6UX73 402 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 DLEU7Q6UYE1 221 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 DHDDSQ86SQ9 333 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
CDK5RAP3-229ENST00000583697 KRT73Q86Y46 540 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms