RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 C6orf203Q9P0P8 240 aaPredicted RBP2.12□□□□□ -2.07
COPS3-217ENST00000583160 OTOGLQ3ZCN5 2332 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 CACNA1AO00555 2505 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 DOCK6Q96HP0 2047 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 ERICH2A1L162 156 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 AIREO43918 545 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 OR10H3O60404 316 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 CCNE2O96020 404 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 ALPPL2P10696 532 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 RALAP11233 206 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 IGFBP3P17936 291 aaPredicted RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 SFNP31947 248 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 SH3BGRP55822 239 aaPredicted RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 ACTA1P68133 377 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 ITGB3BPQ13352 177 aaPredicted RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 LINC00483Q53H64 154 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 GALNT17Q6IS24 598 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 NEK5Q6P3R8 708 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 TMEM26Q6ZUK4 368 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 LANCL3Q6ZV70 420 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 TMCO2Q7Z6W1 182 aaPredicted RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 TAF8Q7Z7C8 310 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 NRMQ8IXM6 262 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 BATF2Q8N1L9 274 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 RNF182Q8N6D2 247 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 MRPL43Q8N983 215 aaKnown RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 ANKRD20A12PQ8NF67 263 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 VN1R2Q8NFZ6 395 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 ZNF596Q8TC21 504 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 PHF10Q8WUB8 498 aaKnown RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 DNAJB3Q8WWF6 145 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 OR5B2Q96R09 309 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 RIT2Q99578 217 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 CITED1Q99966 193 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 SLC25A22Q9H936 323 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 KCNN3Q9UGI6 736 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 NUFIP1Q9UHK0 495 aaKnown RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 ANGPTL2Q9UKU9 493 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 PATJQ8NI35 1801 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 TET2Q6N021 2002 aaPredicted RBP2.11□□□□□ -2.07
COPS3-217ENST00000583160 GVINP1Q7Z2Y8 2422 aa2.11□□□□□ -2.07
COPS3-217ENST00000583160 TRIP11Q15643 1979 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 DNAH14Q0VDD8 3507 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 A0A1B0GWB2 263 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 OR6C65A6NJZ3 312 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 FAM74A7A6NL05 159 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 M0QZ92 97 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 LYPLA2O95372 231 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 PLEKHA8P1O95397 391 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 HBQ1P09105 142 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 ANXA3P12429 323 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 GNA11P29992 359 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 NMT1P30419 496 aaKnown RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 CD52P31358 61 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 AKT2P31751 481 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 OSTNP61366 133 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 RGS1Q08116 209 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 PPP2R5CQ13362 524 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 EXOSC2Q13868 293 aaKnown RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 NDUFA9Q16795 377 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 FAM74A3Q4VXF1 159 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 CLLU1OSQ5K130 101 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 CASC1Q6TDU7 716 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 FAM228AQ86W67 206 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 ECHDC2Q86YB7 292 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 LRRC43Q8N309 656 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 PNKDQ8N490 385 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 CNIH3Q8TBE1 160 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 AENQ8WTP8 325 aaKnown RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 CCDC12Q8WUD4 166 aaPredicted RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 CHCHD10Q8WYQ3 142 aaPredicted RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 KRT35Q92764 455 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 NCLNQ969V3 563 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 VMP1Q96GC9 406 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 CELF6Q96J87 481 aaKnown RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 TMEM175Q9BSA9 504 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 TPK1Q9H3S4 243 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 DHX33Q9H6R0 707 aaKnown RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 AZI2Q9H6S1 392 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 LPAR2Q9HBW0 351 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 VAT1LQ9HCJ6 419 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 EPS15L1Q9UBC2 864 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 IL20RAQ9UHF4 553 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 CYTH4Q9UIA0 394 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 STRAPQ9Y3F4 350 aaKnown RBP2.1□□□□□ -2.07
COPS3-217ENST00000583160 VWA8A3KMH1 1905 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 MIA3Q5JRA6 1907 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 DENND4CQ5VZ89 1909 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 SPTBN4Q9H254 2564 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 COL4A2P08572 1712 aa2.1□□□□□ -2.07
COPS3-217ENST00000583160 PDCD11Q14690 1871 aaKnown RBP2.09□□□□□ -2.07
COPS3-217ENST00000583160 GPR179Q6PRD1 2367 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 EP300Q09472 2414 aaPredicted RBP2.09□□□□□ -2.07
COPS3-217ENST00000583160 F5P12259 2224 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 ZNF292O60281 2723 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 CITO14578 2027 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 RNF222A6NCQ9 220 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 HELTA6NFD8 242 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 SMCO2A6NFE2 343 aa2.09□□□□□ -2.07
COPS3-217ENST00000583160 HIDE1A8MVS5 230 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms