RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 THRBP10828 461 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 MPGP29372 298 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 HOXC12P31275 282 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 RBM34P42696 430 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 MNAT1P51948 309 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 IST1P53990 364 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 UGT2B15P54855 530 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 POU3F1Q03052 451 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ST3GAL3Q11203 375 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 KEAP1Q14145 624 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 KRT72Q14CN4 511 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 GABRA6Q16445 453 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ZNF74Q16587 644 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 MS4A18Q3C1V0 323 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 SAMD4BQ5PRF9 694 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 OR7E24Q6IFN5 339 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 PAMR1Q6UXH9 720 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 P2RY8Q86VZ1 359 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 DEFB107AQ8IZN7 70 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 PFN4Q8NHR9 129 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 TMEM255BQ8WV15 326 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 TMEM239Q8WW34 195 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 NINJ1Q92982 152 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 CDRT15Q96T59 188 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ZNF426Q9BUY5 554 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 AMBRA1Q9C0C7 1298 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ESRP2Q9H6T0 727 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 FKRPQ9H9S5 495 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 CCM2LQ9NUG4 571 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 RPS6KA6Q9UK32 745 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 A4GNTQ9UNA3 340 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 NOX1Q9Y5S8 564 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 LOC102725191A0A1B0GVB3 256 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 A0A1W2PR80 420 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 J3KTA2 159 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 PDLIM1O00151 329 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 TRAF3IP2O43734 574 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 UPK3AO75631 287 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 MT-ND1P03886 318 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 RAF1P04049 648 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 LOXP28300 417 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 CARD17Q5XLA6 110 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 HMBOX1Q6NT76 420 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 ZNF704Q6ZNC4 412 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 SSX8Q7RTT4 187 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 NANOGNBQ7Z5D8 188 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 GPR137CQ8N3F9 429 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 LRRC17Q8N6Y2 441 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 RBM15BQ8NDT2 890 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 C1orf162Q8NEQ5 155 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 SGTBQ96EQ0 304 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 NSL1Q96IY1 281 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 HS6ST2Q96MM7 605 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 MUS81Q96NY9 551 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 EMC6Q9BV81 110 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 FNDC11Q9BVV2 318 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 MEPEQ9NQ76 525 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 MED29Q9NX70 200 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 RHCGQ9UBD6 479 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 MAGEL2Q9UJ55 1249 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 ZNF229Q9UJW7 825 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 SAMD4AQ9UPU9 718 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 MED31Q9Y3C7 131 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 SNX13Q9Y5W8 968 aa11.08□□□□□ -0.64
SMARCE1-218ENST00000582955 CCDC168Q8NDH2 2452 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 B2RBV5 119 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 CLOCKO15516 846 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 RNF13O43567 381 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 OR7A10O76100 309 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 ZNF432O94892 652 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 PLAUP00749 431 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 CD3EP07766 207 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 HSD17B1P14061 328 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 MSX2P35548 267 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 ART1P52961 327 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 ROR2Q01974 943 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 TRAM2Q15035 370 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 NCMAPQ5T1S8 102 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 KLHL24Q6TFL4 600 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 LINGO2Q7L985 606 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 SLC46A3Q7Z3Q1 461 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 PXKQ7Z7A4 578 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 CYP4Z1Q86W10 505 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 OFCC1Q8IZS5 231 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 C17orf78Q8N4C9 275 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 PIK3C3Q8NEB9 887 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 BCAS4Q8TDM0 211 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 TXNDC15Q96J42 360 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 OR2M2Q96R28 347 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 LINC00470Q9BZP3 86 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
SMARCE1-218ENST00000582955 RNF115Q9Y4L5 304 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 586.5 ms