RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, human

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SS18-222	ENST00000582792	TACR3	P29371	465 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	SLC1A3	P43003	542 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	CRAT	P43155	626 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	IDH3G	P51553	393 aa	Predicted RBP	11.78	□□□□□ -0.52
SS18-222	ENST00000582792	CHN2	P52757	468 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	DSTN	P60981	165 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	HPCA	P84074	193 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	RUNX1T1	Q06455	604 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	GNA13	Q14344	377 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	KRT72	Q14CN4	511 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	C3orf36	Q3SXR2	165 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	GPAT3	Q53EU6	434 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	COX20	Q5RI15	118 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	CMIP	Q8IY22	773 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	TMEM99	Q8N816	258 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	OR9K2	Q8NGE7	335 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	OR8J3	Q8NGG0	315 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	OR1K1	Q8NGR3	316 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	BCAS4	Q8TDM0	211 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	HPS1	Q92902	700 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	LRRC58	Q96CX6	371 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	AURKB	Q96GD4	344 aa	Predicted RBP	11.78	□□□□□ -0.52
SS18-222	ENST00000582792	SPATA9	Q9BWV2	254 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	RAB1B	Q9H0U4	201 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	PIF1	Q9H611	641 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	EFCAB1	Q9HAE3	211 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	CRNN	Q9UBG3	495 aa	Predicted RBP	11.78	□□□□□ -0.52
SS18-222	ENST00000582792	P2RX2	Q9UBL9	471 aa		11.78	□□□□□ -0.52
SS18-222	ENST00000582792	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.78	□□□□□ -0.52
SS18-222	ENST00000582792	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.78	□□□□□ -0.52
SS18-222	ENST00000582792	FBXO9	Q9UK97	447 aa	Predicted RBP	11.78	□□□□□ -0.52
SS18-222	ENST00000582792	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	PRAMEF27	A3QJZ7	478 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	TMEM247	A6NEH6	219 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	LIPT2	A6NK58	231 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	AQP7P3	A6NL99	342 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	KRT33A	O76009	404 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	AKR7A3	O95154	331 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	LGI1	O95970	557 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	GPI	P06744	558 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	ETFA	P13804	333 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	DAO	P14920	347 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	IL2RG	P31785	369 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	SRP14	P37108	136 aa	Known RBP	11.77	□□□□□ -0.53
SS18-222	ENST00000582792	UBE2N	P61088	152 aa	Known RBP	11.77	□□□□□ -0.53
SS18-222	ENST00000582792	NAAA	Q02083	359 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	CEACAM7	Q14002	265 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	ANKRD16	Q6P6B7	361 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	VHLL	Q6RSH7	139 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	LINC01356	Q8N9X3	169 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	HOPX	Q9BPY8	73 aa	Predicted RBP	11.77	□□□□□ -0.53
SS18-222	ENST00000582792	TMEM38A	Q9H6F2	299 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	A4GALT	Q9NPC4	353 aa		11.77	□□□□□ -0.53
SS18-222	ENST00000582792	AGAP5	A6NIR3	686 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	ZNF587B	E7ETH6	402 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	FXYD1	O00168	92 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	LILRA1	O75019	489 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	IGLV1-44	P01699	117 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	C1QC	P02747	245 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	TFPT	P0C1Z6	253 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	CECR9	P0C854	216 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	ARAF	P10398	606 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	NR2F1	P10589	423 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	APEX1	P27695	318 aa	Known RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	CALCR	P30988	508 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	CRISP3	P54108	245 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	CDH15	P55291	814 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	RBBP4	Q09028	425 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	EPS8	Q12929	822 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	OR7A5	Q15622	319 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	GCNT6	Q5T4J0	391 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	C12orf54	Q6X4T0	127 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	NET1	Q7Z628	596 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	ARPIN	Q7Z6K5	226 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	SERPINA11	Q86U17	422 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	GPAT4	Q86UL3	456 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	POU5F2	Q8N7G0	328 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	NUP37	Q8NFH4	326 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	OR4F15	Q8NGB8	312 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	PNPT1	Q8TCS8	783 aa	Known RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	NEU4	Q8WWR8	484 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	BCL2L2	Q92843	193 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	RCN3	Q96D15	328 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	PLA2G12A	Q9BZM1	189 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	ADAM19	Q9H013	955 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	SLC38A1	Q9H2H9	487 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	MOV10	Q9HCE1	1003 aa	Known RBP	11.76	□□□□□ -0.53
SS18-222	ENST00000582792	BCL2L10	Q9HD36	194 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	TAGLN3	Q9UI15	199 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792	PRDM4	Q9UKN5	801 aa		11.76	□□□□□ -0.53
SS18-222	ENST00000582792		A0A0G2JPF8	293 aa		11.75	□□□□□ -0.53
SS18-222	ENST00000582792	CFAP73	A6NFT4	308 aa		11.75	□□□□□ -0.53
SS18-222	ENST00000582792	OR6C65	A6NJZ3	312 aa		11.75	□□□□□ -0.53
SS18-222	ENST00000582792	HNRNPCL2	B2RXH8	293 aa		11.75	□□□□□ -0.53
SS18-222	ENST00000582792	HNRNPCL3	B7ZW38	293 aa		11.75	□□□□□ -0.53

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