RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	CDHR3	Q6ZTQ4	885 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC16A9	Q7RTY1	509 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	THOC6	Q86W42	341 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	KRTAP7-1	Q8IUC3	87 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	LAX1	Q8IWV1	398 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	LRRC34	Q8IZ02	419 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ARL6IP6	Q8N6S5	226 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	KLHDC1	Q8N7A1	406 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453		Q8N9G6	341 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TRPV3	Q8NET8	790 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	NT5C	Q8TCD5	201 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	MRGPRD	Q8TDS7	321 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC26A7	Q8TE54	656 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TM4SF19	Q96DZ7	209 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	GMPPA	Q96IJ6	420 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ART5	Q96L15	291 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ATP6V1G3	Q96LB4	118 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ZIM3	Q96PE6	472 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TGM7	Q96PF1	710 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	OR2A5	Q96R48	311 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	OR4K3	Q96R72	315 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF382	Q96SR6	550 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RUFY1	Q96T51	708 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	CCT7	Q99832	543 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	AIF1L	Q9BQI0	150 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PIGQ	Q9BRB3	760 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	DPH7	Q9BTV6	452 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ERVK-6	Q9BXR3	956 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	NLN	Q9BYT8	704 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SHCBP1L	Q9BZQ2	653 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ROGDI	Q9GZN7	287 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	IQCG	Q9H095	443 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC26A1	Q9H2B4	701 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RHBG	Q9H310	441 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	C5orf66	Q9H5L9	145 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	XKR8	Q9H6D3	395 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ALG9	Q9H6U8	611 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TMBIM4	Q9HC24	238 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	MRPS30	Q9NP92	439 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ASCL3	Q9NQ33	180 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	CD274	Q9NZQ7	290 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM216	Q9P0N5	145 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	OPTC	Q9UBM4	332 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TAC3	Q9UHF0	121 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PCTP	Q9UKL6	214 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	EMCN	Q9ULC0	261 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RUVBL2	Q9Y230	463 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC22A14	Q9Y267	594 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RPH3A	Q9Y2J0	694 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TDRKH	Q9Y2W6	561 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PLLP	Q9Y342	182 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC22A7	Q9Y694	548 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ABCA7	Q8IZY2	2146 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	LRP4	O75096	1905 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TRPM6	Q9BX84	2022 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	IGLV3-12	A0A075B6K2	115 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TRAV18	A0A075B6X5	111 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453		A0A087WW49	117 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453		A0A1B0GX78	115 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453		A0A1W2PQ72	361 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM129	A0AVI4	362 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	KRT87P	A6NCN2	255 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ANKRD61	A6NGH8	418 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	EFCAB7	A8K855	629 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM114	B3SHH9	223 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SUPT3H	B4E1H0	165 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	C21orf140	B9A014	251 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453		E7EQ34	232 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	UBXN8	O00124	270 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	FOXE1	O00358	373 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	DYNC1I1	O14576	645 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	POLR1C	O15160	346 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ARHGEF9	O43307	516 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SCO2	O43819	266 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SUPT3H	O75486	399 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	OR2B3	O76000	313 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SEMA3D	O95025	777 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	NSA2	O95478	260 aa	Known RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	CLDN9	O95484	217 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	GUCA1C	O95843	209 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SERPINE1	P05121	402 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ALPP	P05187	535 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	BPGM	P07738	259 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SERPINA6	P08185	405 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	FGF4	P08620	206 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC35G6	P0C7Q6	338 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SMIM10L1	P0DMW3	83 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MYL2	P10916	166 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	LIPC	P11150	499 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	GFAP	P14136	432 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	CPA3	P15088	417 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	FOLR1	P15328	257 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	MAG	P20916	626 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF10	P21506	573 aa	Predicted RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	CA6	P23280	308 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	RBMS1	P29558	406 aa	Known RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	RORA	P35398	523 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	SLCO1A2	P46721	670 aa		2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	STXBP1	P61764	594 aa	Known RBP	2.7	□□□□□ -1.98
MSI2-215	ENST00000582453	PPP1CA	P62136	330 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms