RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 GPR32P1Q8NGA4 272 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 OR6T1Q8NGN1 323 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 OR1K1Q8NGR3 316 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 RP9Q8TA86 221 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 Q96MF0 132 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 DHRS9Q9BPW9 319 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 ALG2Q9H553 416 aa11.03□□□□□ -0.64
CDK5RAP3-222ENST00000581708 HTR3EA5X5Y0 456 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 M0R1B8 84 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TRAF3IP2O43734 574 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CCDC22O60826 627 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 BGLAPP02818 100 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SOD3P08294 240 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 BMP4P12644 408 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NQO1P15559 274 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CLDN17P56750 224 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PUDPQ08623 228 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PMS2P3Q13401 168 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 KRTAP21-3Q3LHN1 58 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 REP15Q6BDI9 236 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SLC22A25Q6T423 547 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 GPR137CQ8N3F9 429 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 RNF217Q8TC41 542 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ADAMTS16Q8TE57 1224 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PROX1Q92786 737 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 BCL2L2Q92843 193 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TAMM41Q96BW9 452 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZNF426Q9BUY5 554 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 POU2F3Q9UKI9 436 aa11.02□□□□□ -0.65
CDK5RAP3-222ENST00000581708 MS4A18H0YCH9 400 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 M0R3H8 397 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NDUFAB1O14561 156 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ENTPD5O75356 428 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 UPK3AO75631 287 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 OPN1SWP03999 348 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 THRBP10828 461 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TTKP33981 857 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 RBM34P42696 430 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ROR2Q01974 943 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NPTX1Q15818 432 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 MS4A18Q3C1V0 323 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TBRG1Q3YBR2 411 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 RABL3Q5HYI8 236 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ENTPD8Q5MY95 495 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 C9orf135Q5VTT2 229 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TTC33Q6PID6 262 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TMEM123Q8N131 208 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 FBXL14Q8N1E6 418 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 OR5J2Q8NH18 312 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ADAD1Q96M93 576 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZNF583Q96ND8 569 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ALKBH3Q96Q83 286 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 OR2M2Q96R28 347 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 WFDC6Q9BQY6 131 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 KATNB1Q9BVA0 655 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 B3GAT2Q9NPZ5 323 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CBLN4Q9NTU7 201 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CRNNQ9UBG3 495 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZNF229Q9UJW7 825 aa11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 FBXO9Q9UK97 447 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZNF469Q96JG9 3925 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-222ENST00000581708 HEATR1Q9H583 2144 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TLN2Q9Y4G6 2542 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 LOC100653049A0A140TA62 436 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 FAM220BPB1ANY3 271 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 E7EQL1 145 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PLPP3O14495 311 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 KRT34O76011 436 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 LYPD3O95274 346 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CD8AP01732 235 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 HEXAP06865 529 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CRYBA2P53672 197 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CHRNB3Q05901 458 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 LTBQ06643 244 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZP4Q12836 540 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 HIKESHIQ53FT3 197 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NHLRC1Q6VVB1 395 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZNF627Q7L945 461 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 C20orf196Q8IYI0 205 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 KDM8Q8N371 416 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 MUC15Q8N387 334 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 C10orf53Q8N6V4 93 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 IL17RDQ8NFM7 739 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 C10orf82Q8WW14 230 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NEUROG1Q92886 237 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SLC38A2Q96QD8 506 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 HOPXQ9BPY8 73 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 DENND2DQ9H6A0 471 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 GPR35Q9HC97 309 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SEC14L4Q9UDX3 406 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 VPS13CQ709C8 3753 aa11□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZFHX3Q15911 3703 aa10.99□□□□□ -0.65
CDK5RAP3-222ENST00000581708 A0A1W2PR80 420 aa10.99□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ELOVL7A1L3X0 281 aa10.99□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CPSF4LA6NMK7 179 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms