RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GSDMCQ9BYG8 508 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 UCK1Q9HA47 277 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 NTN4Q9HB63 628 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CLEC5AQ9NY25 188 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 P2RX2Q9UBL9 471 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CYTH4Q9UIA0 394 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 ZNF107Q9UII5 783 aaPredicted RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 VANGL2Q9ULK5 521 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 TP53TG3Q9ULZ0 132 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 SLCO1B1Q9Y6L6 691 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 RLFQ13129 1914 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 SZT2Q5T011 3432 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 BAZ2AQ9UIF9 1905 aaKnown RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 IGLV3-10A0A075B6K4 115 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 A0A0D9SFI3 127 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 WASHC1A8K0Z3 465 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 FOXI3A8MTJ6 420 aaPredicted RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 PPIAL4DF5H284 164 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 GOLGA8MH3BSY2 632 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PHOX2AO14813 284 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 TRAPPC3O43617 180 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 TIMM8AO60220 97 aaPredicted RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 SDC3O75056 442 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 SNAI1O95863 264 aaPredicted RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 KRT6AP02538 564 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 CCL2P13500 99 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 FOSL2P15408 326 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 NQO2P16083 231 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 CALML3P27482 149 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PPP2R1BP30154 601 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 RORAP35398 523 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 NOVP48745 357 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 ACADVLP49748 655 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PPT1P50897 306 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 ACLYP53396 1101 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 ATP5J2P56134 94 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 STX17P56962 302 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 MADCAM1Q13477 382 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 CRMP1Q14194 572 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PIGHQ14442 188 aaPredicted RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 DMC1Q14565 340 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 CCDC14Q49A88 953 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 GPR157Q5UAW9 335 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 IL23RQ5VWK5 629 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 RFWD3Q6PCD5 774 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 WASH2PQ6VEQ5 465 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 ITIH5Q86UX2 942 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PARP8Q8N3A8 854 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 GTPBP8Q8N3Z3 284 aaPredicted RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 FBXL16Q8N461 479 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 DEFB123Q8N688 67 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 OR10H4Q8NGA5 316 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 OR6M1Q8NGM8 313 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 OR6T1Q8NGN1 323 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 DTX3LQ8TDB6 740 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 BADQ92934 168 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 TNFRSF14Q92956 283 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 GLYATL1Q969I3 302 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 TM4SF19Q96DZ7 209 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 CERS2Q96G23 380 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PPP1R16AQ96I34 528 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 VPS35Q96QK1 796 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 ST6GALNAC5Q9BVH7 336 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 SHCBP1LQ9BZQ2 653 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 OPN3Q9H1Y3 402 aaPredicted RBP3.39□□□□□ -1.87
NF1-220ENST00000581113 COG4Q9H9E3 785 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 SLC25A19Q9HC21 320 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 CUTCQ9NTM9 273 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 SCML1Q9UN30 329 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 PIGLQ9Y2B2 252 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 POFUT2Q9Y2G5 429 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 LAMA3Q16787 3333 aa3.39□□□□□ -1.87
NF1-220ENST00000581113 ALPK3Q96L96 1907 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 EEF2KO00418 725 aaKnown RBP3.38□□□□□ -1.87
NF1-220ENST00000581113 SULT1B1O43704 296 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 CALUO43852 315 aaPredicted RBP3.38□□□□□ -1.87
NF1-220ENST00000581113 LCMT2O60294 686 aaKnown RBP3.38□□□□□ -1.87
NF1-220ENST00000581113 NME2P1O60361 137 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 FTH1P02794 183 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 HSPD1P10809 573 aaKnown RBP3.38□□□□□ -1.87
NF1-220ENST00000581113 HSD17B1P14061 328 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 TSPAN8P19075 237 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 CYP3A5P20815 502 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 GSTM3P21266 225 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 DPP4P27487 766 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 TRIM23P36406 574 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 GEMP55040 296 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 CDH6P55285 790 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 KRTAP10-3P60369 221 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 SNAP25P60880 206 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 SSTP61278 116 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 LRRC63Q05C16 580 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 SHHQ15465 462 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 UNC50Q53HI1 259 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 CTSL3PQ5NE16 218 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 PDZK1Q5T2W1 519 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 LIPNQ5VXI9 398 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 NKAIN2Q5VXU1 208 aa3.38□□□□□ -1.87
NF1-220ENST00000581113 RNLSQ5VYX0 342 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms