RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 FCRLAQ7L513 359 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 MSRB3Q8IXL7 192 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 GABRG1Q8N1C3 465 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 MAPK1IP1LQ8NDC0 245 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 FAM71CQ8NEG0 241 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 KBTBD8Q8NFY9 601 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 OR8J2Q8NGG1 315 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 OR6K3Q8NGY3 331 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 LILRB1Q8NHL6 650 aaPredicted RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 RNF128Q8TEB7 428 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 ZNF75CPQ92670 426 aaPredicted RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 RAB24Q969Q5 203 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 TESCQ96BS2 214 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 S100PBPQ96BU1 408 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 NEURL3Q96EH8 262 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 GMPPAQ96IJ6 420 aaPredicted RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 ZFP3Q96NJ6 502 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 CCDC115Q96NT0 180 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 OR52E6Q96RD3 313 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 FOXC2Q99958 501 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 WFDC6Q9BQY6 131 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 C1QTNF6Q9BXI9 259 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 ACTR6Q9GZN1 396 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 LAT2Q9GZY6 243 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 C11orf54Q9H0W9 315 aaPredicted RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 MANSC1Q9H8J5 431 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 PLSCR4Q9NRQ2 329 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 ACER3Q9NUN7 267 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 ATAD3AQ9NVI7 634 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 RLIMQ9NVW2 624 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 NPAP1Q9NZP6 1156 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 HAO1Q9UJM8 370 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 MCTS1Q9ULC4 181 aaKnown RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 WDR45Q9Y484 360 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 CSPG4Q6UVK1 2322 aa3.5□□□□□ -1.85
DDX42-211ENST00000580108 ZNF469Q96JG9 3925 aaPredicted RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 SONP18583 2426 aaKnown RBP3.5□□□□□ -1.85
DDX42-211ENST00000580108 YLPM1P49750 1951 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 TMED7-TICAM2A0A0A6YYA0 188 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 DPRXA6NFQ7 191 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ZNF716A6NP11 495 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 FAM171A2A8MVW0 826 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SULT2B1O00204 365 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 NR5A2O00482 541 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 HDAC3O15379 428 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CLOCKO15516 846 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 TPST1O60507 370 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 EIF4E2O60573 245 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 STX11O75558 287 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 PRKD3O94806 890 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 BCHEP06276 602 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CRHP06850 196 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CHRM2P08172 466 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 KRT16P08779 473 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 HOXB9P17482 250 aaPredicted RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 RPS4Y1P22090 263 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 CBLP22681 906 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 IGHV1-2P23083 117 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ME2P23368 584 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ELK4P28324 431 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SLC7A1P30825 629 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CDKN1AP38936 164 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 OR3A2P47893 321 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CLNS1AP54105 237 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 SUMO3P55854 103 aaPredicted RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 EEFSECP57772 596 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 OR2B6P58173 313 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CTXN1P60606 82 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 TUBA1BP68363 451 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 TUBA4AP68366 448 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 PSPHP78330 225 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 NKX6-1P78426 367 aaPredicted RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 KCNJ10P78508 379 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 RASGEF1BQ0VAM2 473 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 FAPQ12884 760 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SELENBP1Q13228 472 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 MAD2L1Q13257 205 aaPredicted RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 CBFBQ13951 182 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SELPLGQ14242 412 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CAPRIN1Q14444 709 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 TAB1Q15750 504 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 STK11Q15831 433 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ACKR1Q16570 336 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SMU1Q2TAY7 513 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 CD300EQ496F6 205 aaPredicted RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 GLIPR1L2Q4G1C9 344 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SYT14P1Q58G82 188 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 SLC25A53Q5H9E4 307 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 PAGE3Q5JUK9 113 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 C6orf10Q5SRN2 563 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 MRPL2Q5T653 305 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 ANXA8L1Q5VT79 327 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ABLIM2Q6H8Q1 611 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ADAM5Q6NVV9 412 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 B3GLCTQ6Y288 498 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 ZNF704Q6ZNC4 412 aaPredicted RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 TUBA1AQ71U36 451 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 EIF3MQ7L2H7 374 aaKnown RBP3.49□□□□□ -1.85
DDX42-211ENST00000580108 SPATA19Q7Z5L4 167 aa3.49□□□□□ -1.85
DDX42-211ENST00000580108 MTERF4Q7Z6M4 381 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms